DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmu and RIF10

DIOPT Version :10

Sequence 1:NP_477159.1 Gene:Hmu / 43294 FlyBaseID:FBgn0015737 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_187021.2 Gene:RIF10 / 821181 AraportID:AT3G03710 Length:922 Species:Arabidopsis thaliana


Alignment Length:201 Identity:42/201 - (20%)
Similarity:68/201 - (33%) Gaps:77/201 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 YGPECLIARNNEIYTGIHGGEVIKLTSNHVTHVTKIGQPCEDIYEESRCGRPLGL-AFDTQGNNL 131
            |.|..||.:       :|..:|..|..:.       |:..:.|.|||      |: |.|.|.:..
plant   690 YAPLILIMK-------VHPSKVYSLIGSG-------GKKVKSIIEES------GVEAIDMQDDGT 734

  Fly   132 IIADAYYGLWQVDLGTNKKTLLVSPAQELAGKSINRPAKIFNGVT-VSKEGDVYWTDSSSDFTIE 195
            :                 |.:.:..|      |:.|...|.:|:| |...||:|          .
plant   735 V-----------------KIMAIDVA------SLERAKAIISGLTMVPSVGDIY----------R 766

  Fly   196 DLVFASFANPSGRLFKYNRSK----NVSEVLLDELAFANGLALSPNEDF----------IVVAET 246
            :....|.| |.|...:....:    ::||:..:.||       .|.:.:          |.|.|.
plant   767 NCEIKSMA-PYGAFVEIAPGREGLCHISELSAEWLA-------KPEDAYKVGDRIDVKLIEVNEK 823

  Fly   247 GAMRLT 252
            |.:||:
plant   824 GQLRLS 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmuNP_477159.1 YvrE 61..>287 CDD:442613 42/201 (21%)
RIF10NP_187021.2 PLN00207 1..900 CDD:215104 42/201 (21%)

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