DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmu and Apmap

DIOPT Version :10

Sequence 1:NP_477159.1 Gene:Hmu / 43294 FlyBaseID:FBgn0015737 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_082253.1 Gene:Apmap / 71881 MGIID:1919131 Length:415 Species:Mus musculus


Alignment Length:420 Identity:132/420 - (31%)
Similarity:215/420 - (51%) Gaps:54/420 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GLLYALRVRIMNFMIFFL---------LIILMPGLPPRTTFPFKDYIVTPPKDLKGALESNFHLE 57
            |..::.||..|.|::..:         :::|...:.|: :|.||:     |..:.|.|..|..|.
Mouse    30 GSSFSGRVFRMTFLMLAVSLAIPLLGAMMLLESPIDPQ-SFSFKE-----PPFMFGVLHPNTKLR 88

  Fly    58 GAERLLEGRVYGPECLIARNNEIYTGIHGGEVIKLTSNHVTHVTKIGQ-PCEDIYEESRCGRPLG 121
            .||||.|.::.|||.::...:.::||...|.|:||.:..:..:.:.|. ||:...:|..||||||
Mouse    89 QAERLFENQLSGPESIVNIGDVLFTGTADGRVVKLENGEIETIARFGSGPCKTRDDEPTCGRPLG 153

  Fly   122 LAFDTQGNNLIIADAYYGLWQVDLGTNKKTLLVSPAQELAGKSINRPAKIFNGVTVSKEG-DVYW 185
            :.....| .|.:.|||.||::|:.......||:|....:.||.::    ..|.:||:::| .:|:
Mouse   154 IRAGPNG-TLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMS----FVNDLTVTRDGRKIYF 213

  Fly   186 TDSSSDFTIED-LVFASFANPSGRLFKYNRSKNVSEVLLDELAFANGLALSPNEDFIVVAETGAM 249
            |||||.:...| |:....|...|||.:|:......:||||:|.|.||:.|||.|||::||||...
Mouse   214 TDSSSKWQRRDYLLLVMEATDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETTMA 278

  Fly   250 RLTKYHLKGAKAGQSEVFVDGLPGLPDNLTPDAE-GIWVPLVQSADSEHPN-GFTLFTRFPSVRL 312
            |:.:.::.|...|.:::||:.:||.|||:.|.:. |.||    :|.:...| ||::.. |.|.:.
Mouse   279 RIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWV----AAATIRANPGFSMLD-FLSDKP 338

  Fly   313 FLARMLALFELPFRYLNSVYPNKFSQRFVHFVGHMESITVLAPKRTTVVRVDWNGNIVGSLHGFD 377
            |:.||  :|::            |||         |::....|:.:.|:.|..:|....|||..|
Mouse   339 FIKRM--IFKM------------FSQ---------ETVMKFVPRYSLVLEVSDSGAFRRSLHDPD 380

  Fly   378 KSAAT-VSHVLEFQDFLFLGSPTNQYLARV 406
            ....| ||...|...:|:|||..:.::.|:
Mouse   381 GQVVTYVSEAHEHDGYLYLGSFRSPFICRL 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmuNP_477159.1 YvrE 61..>287 CDD:442613 82/229 (36%)
ApmapNP_082253.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
YvrE 92..>319 CDD:442613 84/235 (36%)
Str_synth 200..287 CDD:354965 36/86 (42%)
Blue background indicates that the domain is not in the aligned region.

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