DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmu and apmapl

DIOPT Version :9

Sequence 1:NP_477159.1 Gene:Hmu / 43294 FlyBaseID:FBgn0015737 Length:579 Species:Drosophila melanogaster
Sequence 2:XP_031754777.1 Gene:apmapl / 548386 XenbaseID:XB-GENE-5754317 Length:452 Species:Xenopus tropicalis


Alignment Length:396 Identity:127/396 - (32%)
Similarity:190/396 - (47%) Gaps:54/396 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IILMPGLPPRTTFPFKDYIVTPPKDLKGALESNFHLEGAERLLEGRVYGPECLIA-RNNEIYTGI 84
            :.|:|.......|.|.    .||..|.|:|..|..|:...|:..|::.|||.... ....:|||.
 Frog    91 VYLLPSPIDPEPFTFD----KPPPTLVGSLAINRKLQQGRRIFYGQLKGPESFTTDTEGNLYTGT 151

  Fly    85 HGGEVIKLTSNHVTHVTKIGQ---PCEDIYEESRCGRPLGLAFDTQGNNLIIADAYYGLWQVDLG 146
            ..|::..:....:..:|::||   .|.....|..||||.|:.....| .||:||:|:||::|...
 Frog   152 VDGKLWVIRGEQLFFITQMGQNVPECGTPEYEPICGRPHGIRMAPDG-YLIVADSYFGLYRVQPH 215

  Fly   147 TNKKTLLVSPAQELAGKSINRPAKIFNGVTVSKEGDVYWTDSSSDF--------TIEDLVFASFA 203
            |.:|:||:|  .|.....|  |.:..||:.|||.|.:|:|||||.:        .:|       .
 Frog   216 TGEKSLLIS--NEAGLDQI--PFRFLNGLEVSKNGTIYFTDSSSKWGRRHHRYEVLE-------T 269

  Fly   204 NPSGRLFKYNRSKNVSEVLLDELAFANGLALSPNEDFIVVAETGAMRLTKYHLKGAKAGQSEVFV 268
            |..|||.:|:.....::.|||:|..|||:||||.||||:||||...|:.:|.|.|.|||..||||
 Frog   270 NHLGRLLQYDPVTQKAKSLLDKLYMANGIALSPEEDFILVAETSICRIVRYWLTGTKAGMKEVFV 334

  Fly   269 DGLPGLPDNLTPDAEGIWVPLVQSADSEHPNGFTLFTRFPSVRLFLARMLALFELPFRYLNSVYP 333
            |.|||.|||:...:.|.:  .|..:.:..|..||                     ||  |:::.|
 Frog   335 DNLPGYPDNIRLSSVGTY--RVGMSTTRFPGHFT---------------------PF--LDAIAP 374

  Fly   334 NKFSQRFVHFVGHMESITVLAPKRTTVVRVDWNGNIVGSLHGFDKSAA-TVSHVLEFQDFLFLGS 397
            ....:|.:..|..:...::|..|....:.|..:|.::.|.|..|.|.. .:|.|.|.::.|::|:
 Frog   375 YPVLKRLIVKVTPLSLYSILLRKHGLFLEVGEDGEVLASYHDPDGSVTWAISDVFEHKENLYIGN 439

  Fly   398 PTNQYL 403
            ....:|
 Frog   440 TDLPFL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmuNP_477159.1 YvrE 61..>287 CDD:225921 92/237 (39%)
Str_synth 173..258 CDD:304606 40/92 (43%)
apmaplXP_031754777.1 YvrE 154..>352 CDD:225921 84/209 (40%)
Str_synth 238..325 CDD:354965 40/93 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9171
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 169 1.000 Inparanoid score I4018
OMA 1 1.010 - - QHG48544
OrthoDB 1 1.010 - - D336287at33208
OrthoFinder 1 1.000 - - FOG0001350
OrthoInspector 1 1.000 - - otm47786
Panther 1 1.100 - - LDO PTHR10426
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X608
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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