DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hmu and Ssl2

DIOPT Version :9

Sequence 1:NP_477159.1 Gene:Hmu / 43294 FlyBaseID:FBgn0015737 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_651656.2 Gene:Ssl2 / 43424 FlyBaseID:FBgn0041780 Length:414 Species:Drosophila melanogaster


Alignment Length:419 Identity:240/419 - (57%)
Similarity:313/419 - (74%) Gaps:9/419 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLYALRVRIMNFMIFFL-LIILMPGLPPRTTFPFKDYIVTPPKDLKGALESNFHLEGAERLLE 64
            ||.|.|| ::...|::.|| .:.|:|.|.|.|||||:.|.:.|.:||.|.||.|.||.||.:|.:
  Fly     1 MGFLAAL-LKTSLFLVLFLGSLFLLPVLYPSTTFPFEQYFIKPARDLNGTLELNNHLNGARKLWK 64

  Fly    65 GRVYGPECLIARNNEIYTGIHGGEVIKLTSNH-VTHVTKIGQPCEDIYEESRCGRPLGLAFDTQG 128
            .:::||||||...::||||||.||||:|.:.. |..:|||||||:.|:::..||.|:|||.||||
  Fly    65 DQIFGPECLIVLEDKIYTGIHSGEVIRLNNEESVQPITKIGQPCDYIFDDELCGYPVGLALDTQG 129

  Fly   129 NNLIIADAYYGLWQVDLGTNKKTLLVSPAQELAGKSINRPAKIFNGVTVSKEGDVYWTDSSSDFT 193
            ||||::|||||:|||||.|.|||:||...|.|.||..||.||:||.:.:|::||::||||.|   
  Fly   130 NNLIVSDAYYGIWQVDLETKKKTVLVPAEQILPGKGANRRAKLFNSLVISRQGDIFWTDSFS--- 191

  Fly   194 IEDLVFASFANPSGRLFKYNRSKNVSEVLLDELAFANGLALSPNEDFIVVAETGAMRLTKYHLKG 258
             ||.|||:|||||||||:|:|.|..:|||||||:|||||||||:||||::|||.||||.:|:|||
  Fly   192 -EDFVFAAFANPSGRLFRYDRVKKTNEVLLDELSFANGLALSPSEDFIILAETTAMRLRRYYLKG 255

  Fly   259 AKAGQSEVFVDGLPGLPDNLTPDAEGIWVPLVQSADSEHPNGFTLFTRFPSVRLFLARMLALFEL 323
            ::||:|||||:||||.|||||.|.|||||||..::||::||.|.:...:|.:|.||||::||..|
  Fly   256 SRAGESEVFVEGLPGCPDNLTADEEGIWVPLSVASDSQNPNLFAVLAPYPRLRSFLARLVALMRL 320

  Fly   324 PFRYLNSVYPNKFSQRFVHFVGHMESITVLAPKRTTVVRVDWNGNIVGSLHGFDKSAATVSHVLE 388
            |.|.||.:|||..:.|..|....:  :...||||:||||||||||||.||||||:||:.:|||||
  Fly   321 PLRVLNHIYPNDIAARLFHSFNDL--VIRNAPKRSTVVRVDWNGNIVRSLHGFDRSASGISHVLE 383

  Fly   389 FQDFLFLGSPTNQYLARVKSPKAKQPTLK 417
            .:..|:||||.|.|:|:||.|:....::|
  Fly   384 VKGHLYLGSPFNHYVAKVKLPEEGLKSVK 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmuNP_477159.1 YvrE 61..>287 CDD:225921 143/226 (63%)
Str_synth 173..258 CDD:304606 55/84 (65%)
Ssl2NP_651656.2 YvrE 80..>284 CDD:225921 136/207 (66%)
Str_synth 174..256 CDD:304606 56/85 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473007
Domainoid 1 1.000 63 1.000 Domainoid score I3710
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I1870
Isobase 1 0.950 - 0 Normalized mean entropy S5287
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D28231at7147
OrthoFinder 1 1.000 - - FOG0001350
OrthoInspector 1 1.000 - - mtm6391
orthoMCL 1 0.900 - - OOG6_101875
Panther 1 1.100 - - P PTHR10426
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3581
SonicParanoid 1 1.000 - - X608
1211.880

Return to query results.
Submit another query.