DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmu and C08E8.2

DIOPT Version :9

Sequence 1:NP_477159.1 Gene:Hmu / 43294 FlyBaseID:FBgn0015737 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_507590.2 Gene:C08E8.2 / 182407 WormBaseID:WBGene00007438 Length:338 Species:Caenorhabditis elegans


Alignment Length:361 Identity:103/361 - (28%)
Similarity:161/361 - (44%) Gaps:47/361 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LLEGRVYGPECLIARNNEIYTGIHGGEVIKLTSNHV--THV---TKIGQPCEDIYE-ESRCGRPL 120
            :|||:|.|||.::..:..||..::..:|:|:....|  |.|   ..|..|....:| |:.|||||
 Worm     9 ILEGQVIGPESMVVDDEAIYVSVNDAKVLKIVDGKVRATAVYSKNPIFPPNMTRFEAEAICGRPL 73

  Fly   121 GLAFDTQG-NNLIIADAYYGLWQVDLGTN---KKTLLVSPAQELAGKSINRPAKIFNGVTVSKEG 181
            |:....:| ...::.|||.|::.:|....   |.|.::..::.:.|   .|| ...|.:.|..|.
 Worm    74 GIRKLVEGTKKFVLVDAYLGVFIIDFSDELRPKSTQILDASKPIDG---FRP-NFLNDLDVISED 134

  Fly   182 DVYWTDSSSDFTIE---DLVFASFANPSGRLFKYNRSKNVSEVLLDELAFANGLALSPNEDFIVV 243
            ::..|.||......   :||...  ...||:.....|....:||...|.|.||:.|:|::...:.
 Worm   135 ELIITHSSIRHDCRHFFNLVLEH--QGDGRILHLKISTGTVKVLAKNLYFPNGIQLTPDKKSAIF 197

  Fly   244 AETGAMRLTKYHLKGAKAGQSEVFVDGLPGLPDNLTPDAEG-IWVPLVQSADSEHPNGFTLFTRF 307
            ||....|:.|..|   :.|:.::|.:.|||||||:.....| .||.|..:....:|:.......:
 Worm   198 AECSMARIKKLDL---ETGKIDIFCENLPGLPDNIRGTPRGTFWVGLAATRSKNYPSLLDRLGNW 259

  Fly   308 PSVRLFLARMLALFELPFRYLNSVYPNKFSQRFVHFVGHMESITVLAPKRTTVVRVDWNGNIVGS 372
            |.||.|..              .:.|.....:.:.|..|..||         :|.:|.||.|:.|
 Worm   260 PGVRQFFV--------------DIVPAAHWMKILVFSKHPHSI---------IVELDSNGKIIRS 301

  Fly   373 LHGF-DKSAATVSHVLEFQDFLFLGSPTNQYLARVK 407
            ||.. .|..:.||.|.|...||:|||..:.|:|:|:
 Worm   302 LHDVTGKHVSDVSQVTEHNGFLYLGSFADTYIAKVE 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmuNP_477159.1 YvrE 61..>287 CDD:225921 69/238 (29%)
Str_synth 173..258 CDD:304606 24/87 (28%)
C08E8.2NP_507590.2 Str_synth 126..207 CDD:354965 22/82 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167765
Domainoid 1 1.000 66 1.000 Domainoid score I6522
eggNOG 1 0.900 - - E1_COG1185
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41380
Inparanoid 1 1.050 133 1.000 Inparanoid score I3165
Isobase 1 0.950 - 0 Normalized mean entropy S5287
OMA 1 1.010 - - QHG48544
OrthoDB 1 1.010 - - D336287at33208
OrthoFinder 1 1.000 - - FOG0001350
OrthoInspector 1 1.000 - - mtm4790
orthoMCL 1 0.900 - - OOG6_101875
Panther 1 1.100 - - O PTHR10426
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3581
SonicParanoid 1 1.000 - - X608
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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