DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hmu and C08E8.2

DIOPT Version :10

Sequence 1:NP_477159.1 Gene:Hmu / 43294 FlyBaseID:FBgn0015737 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_507590.2 Gene:C08E8.2 / 182407 WormBaseID:WBGene00007438 Length:338 Species:Caenorhabditis elegans


Alignment Length:361 Identity:103/361 - (28%)
Similarity:161/361 - (44%) Gaps:47/361 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LLEGRVYGPECLIARNNEIYTGIHGGEVIKLTSNHV--THV---TKIGQPCEDIYE-ESRCGRPL 120
            :|||:|.|||.::..:..||..::..:|:|:....|  |.|   ..|..|....:| |:.|||||
 Worm     9 ILEGQVIGPESMVVDDEAIYVSVNDAKVLKIVDGKVRATAVYSKNPIFPPNMTRFEAEAICGRPL 73

  Fly   121 GLAFDTQG-NNLIIADAYYGLWQVDLGTN---KKTLLVSPAQELAGKSINRPAKIFNGVTVSKEG 181
            |:....:| ...::.|||.|::.:|....   |.|.::..::.:.|   .|| ...|.:.|..|.
 Worm    74 GIRKLVEGTKKFVLVDAYLGVFIIDFSDELRPKSTQILDASKPIDG---FRP-NFLNDLDVISED 134

  Fly   182 DVYWTDSSSDFTIE---DLVFASFANPSGRLFKYNRSKNVSEVLLDELAFANGLALSPNEDFIVV 243
            ::..|.||......   :||...  ...||:.....|....:||...|.|.||:.|:|::...:.
 Worm   135 ELIITHSSIRHDCRHFFNLVLEH--QGDGRILHLKISTGTVKVLAKNLYFPNGIQLTPDKKSAIF 197

  Fly   244 AETGAMRLTKYHLKGAKAGQSEVFVDGLPGLPDNLTPDAEG-IWVPLVQSADSEHPNGFTLFTRF 307
            ||....|:.|..|   :.|:.::|.:.|||||||:.....| .||.|..:....:|:.......:
 Worm   198 AECSMARIKKLDL---ETGKIDIFCENLPGLPDNIRGTPRGTFWVGLAATRSKNYPSLLDRLGNW 259

  Fly   308 PSVRLFLARMLALFELPFRYLNSVYPNKFSQRFVHFVGHMESITVLAPKRTTVVRVDWNGNIVGS 372
            |.||.|..              .:.|.....:.:.|..|..||         :|.:|.||.|:.|
 Worm   260 PGVRQFFV--------------DIVPAAHWMKILVFSKHPHSI---------IVELDSNGKIIRS 301

  Fly   373 LHGF-DKSAATVSHVLEFQDFLFLGSPTNQYLARVK 407
            ||.. .|..:.||.|.|...||:|||..:.|:|:|:
 Worm   302 LHDVTGKHVSDVSQVTEHNGFLYLGSFADTYIAKVE 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HmuNP_477159.1 YvrE 61..>287 CDD:442613 69/238 (29%)
C08E8.2NP_507590.2 YvrE 9..>241 CDD:442613 71/240 (30%)
Str_synth 126..207 CDD:354965 22/82 (27%)

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