DRSC/TRiP Functional Genomics Resources

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Protein Alignment mrt and CG10494

DIOPT Version :10

Sequence 1:NP_651554.1 Gene:mrt / 43291 FlyBaseID:FBgn0039507 Length:775 Species:Drosophila melanogaster
Sequence 2:NP_726079.1 Gene:CG10494 / 37453 FlyBaseID:FBgn0034634 Length:523 Species:Drosophila melanogaster


Alignment Length:305 Identity:57/305 - (18%)
Similarity:105/305 - (34%) Gaps:80/305 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RLLSKVEHNMRQSQGHIQSNQSNASGQDINHLLHTASTGNG-----------VVDDV-DGLLTPM 91
            :||||   .|.:...|..:.:.....|.:..|.:....|.|           |:|.. :......
  Fly   212 KLLSK---EMAKRNCHKGAEKLRIKFQQLRRLYNKVKNGTGKTFEHFEAMRLVLDPTEEEAAADA 273

  Fly    92 RIKAHMSPPYSAGSSVKSDS----LGYSPRPERNLWSRAEMLEMLSIMQNLNALEQLNDRNMKSE 152
            ..:||:|   ||..|..:||    ...|.|...:.|:..|:...|.|:::......|:....::.
  Fly   274 EAEAHLS---SASDSDFNDSDEEEGDASQRSGAHFWTDEEVDSFLLIIRDNGFFRALDGSRKRNF 335

  Fly   153 QVFRQIEEVMRSKGFVKKSSIQIWTKWKFLKSTYNTTTRHGTGVPKVVPE--EVYRVLCRMLSDT 215
            |....|..:: :|..:|::..|:..|.:.|...:.....||....:::|.  |::          
  Fly   336 QTLVHISNIL-AKQDIKRTPHQLRNKLRLLCKRHREAKEHGLDNVRILPRHFELF---------- 389

  Fly   216 NHGGGNSNVNGSLSECGNSMDSSKTAGDDNKED----ILGVEHPIFGFRLGPIKPE-PIDIGYET 275
                                |....|..:|:|.    ::.:..|  .|...|.||. |::     
  Fly   390 --------------------DELIQAPRENRESAISRLIRISKP--SFLKPPGKPSVPLE----- 427

  Fly   276 TEKHDMVSEPDMESFDYEAGSSHADNGDQEDVPHLPFIVSVKHEP 320
                   |:.|..|...:...:.||:.|..|.      :.::.||
  Fly   428 -------SDSDNSSSTCDLLRAAADSEDYVDA------IEMEAEP 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrtNP_651554.1 Myb_DNA-bind_4 120..201 CDD:463994 14/80 (18%)
CG10494NP_726079.1 Myb_DNA-bind_4 44..123 CDD:463994
Myb_DNA-bind_4 178..257 CDD:463994 10/47 (21%)
Myb_DNA-bind_4 304..391 CDD:463994 16/117 (14%)
Blue background indicates that the domain is not in the aligned region.

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