DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5938 and chic1

DIOPT Version :9

Sequence 1:NP_001097947.2 Gene:CG5938 / 43290 FlyBaseID:FBgn0046247 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001188392.1 Gene:chic1 / 564524 ZFINID:ZDB-GENE-030131-7763 Length:173 Species:Danio rerio


Alignment Length:167 Identity:107/167 - (64%)
Similarity:137/167 - (82%) Gaps:0/167 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SFSDFDAIYEDEQLDELEHFQDQTVAPVQEPIIIRGAGNMTVFGLSNRFNAEFPCGLLSRVAPEE 66
            :.:|||.|||.|:.||....::..|....||:::||||::|||||||:|:.|||..|..:|||||
Zfish     7 NMADFDTIYELEEEDERIVSEEHLVRYCPEPVVMRGAGHITVFGLSNKFDTEFPSVLTGKVAPEE 71

  Fly    67 FKATVGRINGVLKKSLPVNVKWLFCGCVCCCCTLGCSLWPVICLSKRTQLTLDKLFEWENNHLYH 131
            ||.::.|:|..|||:||||||||.|||:|||||:||||||||||:|||:.::.||.|||||.|||
Zfish    72 FKTSINRVNACLKKNLPVNVKWLLCGCLCCCCTVGCSLWPVICLNKRTRRSIQKLLEWENNRLYH 136

  Fly   132 KLGLHWRLHKQQCDSNSMMEYVILIEFIPKTPIYRPD 168
            ||||||:|.|::|:||:||||||||||:||.||:|||
Zfish   137 KLGLHWKLSKRKCESNNMMEYVILIEFLPKYPIFRPD 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5938NP_001097947.2 Erf4 49..137 CDD:287258 60/87 (69%)
chic1NP_001188392.1 Erf4 54..142 CDD:287258 60/87 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573898
Domainoid 1 1.000 156 1.000 Domainoid score I4148
eggNOG 1 0.900 - - E1_KOG4101
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 247 1.000 Inparanoid score I3246
OMA 1 1.010 - - QHG47997
OrthoDB 1 1.010 - - D1449345at2759
OrthoFinder 1 1.000 - - FOG0003641
OrthoInspector 1 1.000 - - otm26272
orthoMCL 1 0.900 - - OOG6_105429
Panther 1 1.100 - - O PTHR13005
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2509
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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