DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5938 and chic2

DIOPT Version :10

Sequence 1:NP_651553.2 Gene:CG5938 / 43290 FlyBaseID:FBgn0046247 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_957414.2 Gene:chic2 / 394095 ZFINID:ZDB-GENE-040426-778 Length:170 Species:Danio rerio


Alignment Length:167 Identity:101/167 - (60%)
Similarity:138/167 - (82%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DFDAIYEDEQLDELEH---FQDQTVAPVQEPIIIRGAGNMTVFGLSNRFNAEFPCGLLSRVAPEE 66
            |||.|||:|:.:|.:.   .::|.:....:|:::||:|::|||||||:|.:|||..|..:|||||
Zfish     4 DFDEIYEEEEEEEEDEDRAAEEQLLKYAPDPVVVRGSGHVTVFGLSNKFESEFPSALTGKVAPEE 68

  Fly    67 FKATVGRINGVLKKSLPVNVKWLFCGCVCCCCTLGCSLWPVICLSKRTQLTLDKLFEWENNHLYH 131
            ||:::.|:|..|:|:|||||:||.|||:|||||||.||||||||||||:.:::||.||||:.|||
Zfish    69 FKSSINRVNSCLRKALPVNVRWLLCGCLCCCCTLGFSLWPVICLSKRTRRSIEKLLEWENSRLYH 133

  Fly   132 KLGLHWRLHKQQCDSNSMMEYVILIEFIPKTPIYRPD 168
            ||.|||||.|::|::|:||||||||||:||.||:|||
Zfish   134 KLCLHWRLSKRKCETNNMMEYVILIEFLPKIPIFRPD 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5938NP_651553.2 None
chic2NP_957414.2 Erf4 51..139 CDD:463029 57/87 (66%)

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