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Protein Alignment CG5938 and Chic1
DIOPT Version :9
Sequence 1: | NP_001097947.2 |
Gene: | CG5938 / 43290 |
FlyBaseID: | FBgn0046247 |
Length: | 168 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_001056014.2 |
Gene: | Chic1 / 363484 |
RGDID: | 1589722 |
Length: | 226 |
Species: | Rattus norvegicus |
Alignment Length: | 170 |
Identity: | 100/170 - (58%) |
Similarity: | 133/170 - (78%) |
Gaps: | 12/170 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 EDEQLDELEHFQDQTVAP------------VQEPIIIRGAGNMTVFGLSNRFNAEFPCGLLSRVA 63
|:::.||.|..:::...| ..:|:::||||::|||||||:|:.|||..|..:||
Rat 57 EEDEEDEEEEEEEEVPPPPRVVSEENLRRYAPDPVLVRGAGHITVFGLSNKFDTEFPSVLTGKVA 121
Fly 64 PEEFKATVGRINGVLKKSLPVNVKWLFCGCVCCCCTLGCSLWPVICLSKRTQLTLDKLFEWENNH 128
|||||.::||:|..|||:||||||||.|||:||||||||||||||||:|||:.::.||.|||||.
Rat 122 PEEFKTSIGRVNSCLKKALPVNVKWLLCGCLCCCCTLGCSLWPVICLNKRTRRSIQKLLEWENNR 186
Fly 129 LYHKLGLHWRLHKQQCDSNSMMEYVILIEFIPKTPIYRPD 168
|||||.|||:|.|::|::::||||||||||:||.||:|||
Rat 187 LYHKLALHWKLTKRKCETSNMMEYVILIEFLPKYPIFRPD 226
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5938 | NP_001097947.2 |
Erf4 |
49..137 |
CDD:287258 |
61/87 (70%) |
Chic1 | XP_001056014.2 |
Erf4 |
107..>139 |
CDD:287258 |
17/31 (55%) |
Information from Original Tools:
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