DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5938 and tag-266

DIOPT Version :10

Sequence 1:NP_651553.2 Gene:CG5938 / 43290 FlyBaseID:FBgn0046247 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_497227.1 Gene:tag-266 / 175219 WormBaseID:WBGene00044319 Length:179 Species:Caenorhabditis elegans


Alignment Length:164 Identity:72/164 - (43%)
Similarity:111/164 - (67%) Gaps:7/164 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EDEQLDELEHFQDQTVAPV-----QEPIIIRGAGNMTVFGLSNRFNAEFPCGLLSRVAPEEFKAT 70
            |:.::|.:.. .|:...|:     :||::|||.||:||||:::|||.|:|..|...:||||..||
 Worm    17 EEPEIDVMPS-SDEESEPIYIPKEKEPVVIRGVGNITVFGMNSRFNTEYPPELTGYIAPEELSAT 80

  Fly    71 VGRINGVLKKSLPVNVKWLFCGCVCCCCTLGCSLWPVICLSKRTQLTLDKLFEWENNHLYHKLGL 135
            :.|:|.|||:.:..:.:||.||...|||::|||:|||:||::||.|.|:|..:.||..|||||||
 Worm    81 LSRVNSVLKRHVQTSSRWLLCGLAFCCCSIGCSMWPVLCLNRRTVLALEKCLDHENVSLYHKLGL 145

  Fly   136 HWRLHKQQCD-SNSMMEYVILIEFIPKTPIYRPD 168
            ||.|.::..: |:.:.|||:.::.:||..:..||
 Worm   146 HWSLARRPTEPSDRLTEYVLELKTLPKPALNLPD 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5938NP_651553.2 None
tag-266NP_497227.1 Erf4 59..147 CDD:463029 46/87 (53%)

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