DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5938 and chic2

DIOPT Version :10

Sequence 1:NP_651553.2 Gene:CG5938 / 43290 FlyBaseID:FBgn0046247 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001107383.1 Gene:chic2 / 100135210 XenbaseID:XB-GENE-943338 Length:166 Species:Xenopus tropicalis


Alignment Length:165 Identity:105/165 - (63%)
Similarity:139/165 - (84%) Gaps:0/165 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SDFDAIYEDEQLDELEHFQDQTVAPVQEPIIIRGAGNMTVFGLSNRFNAEFPCGLLSRVAPEEFK 68
            :|||.|||:|:.||....::|.:....:|:|:||.|::|||||||:|.||||..|..:|||||||
 Frog     2 ADFDEIYEEEEEDEERALEEQLLKYSPDPVIVRGCGHVTVFGLSNKFEAEFPSSLTGKVAPEEFK 66

  Fly    69 ATVGRINGVLKKSLPVNVKWLFCGCVCCCCTLGCSLWPVICLSKRTQLTLDKLFEWENNHLYHKL 133
            :::.|:|..|||:||:||:||.|||:|||||||||:|||:||||||:.:::||.|||||.|||||
 Frog    67 SSINRVNSCLKKNLPINVRWLLCGCLCCCCTLGCSMWPVVCLSKRTRRSIEKLLEWENNRLYHKL 131

  Fly   134 GLHWRLHKQQCDSNSMMEYVILIEFIPKTPIYRPD 168
            .|||||.|::|::|:||||||||||:|||||:|||
 Frog   132 CLHWRLSKRKCETNNMMEYVILIEFLPKTPIFRPD 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5938NP_651553.2 None
chic2NP_001107383.1 Erf4 47..135 CDD:463029 58/87 (67%)

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