DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and SAMD1

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_612361.1 Gene:SAMD1 / 90378 HGNCID:17958 Length:538 Species:Homo sapiens


Alignment Length:328 Identity:68/328 - (20%)
Similarity:113/328 - (34%) Gaps:102/328 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1112 PDLHPIGWCEATSHELETPPGYLQPKSVMPCDVEGCRGFGNAKRFNLNVHALRECCPY----APE 1172
            |.|.|.....|...:.:.||...||    |.:....|..|.|:..     :|||...|    ...
Human   209 PPLPPPPQPPAPPQQQQPPPPQPQP----PPEGGAVRAGGAARPV-----SLREVVRYLGGSGGA 264

  Fly  1173 NWRQWRSKTVKPPRVAPENIRRGWAKKTKRACSEAKQAIKEDSQQEIVYPKVAEVVQAKRKTSPC 1237
            ..|..|.:.  ...:..|...||..::|:.......:..:....     |..|....::.|... 
Human   265 GGRLTRGRV--QGLLEEEAAARGRLERTRLGALALPRGDRPGRA-----PPAASARPSRSKRGG- 321

  Fly  1238 EEKVVKKQKQMQKEEDAE---------QVPD--------------ERSLAIARSFVKDY------ 1273
            ||:|::|:::...:||.:         :||:              ||....|:..||::      
Human   322 EERVLEKEEEEDDDEDEDEEDDVSEGSEVPESDRPAGAQHHQLNGERGPQSAKERVKEWTPCGPH 386

  Fly  1274 -------GPQFLPN------YRLWQLNSAFKLDDVRT---------------------------- 1297
                   ||  .|.      :.:..:|.......|.|                            
Human   387 QGQDEGRGP--APGSGTRQVFSMAAMNKEGGTASVATGPDSPSPVPLPPGKPALPGADGTPFGCP 449

  Fly  1298 --------NPLHWTSWDVCEYIERALDSTDIAKVIFEQDIDGRALLMLGRKELDTYLKLKVGPAV 1354
                    :|:.||..||.||...| ...:.|....||:|||::||::.|.::.|.|.:::|||:
Human   450 PGRKEKPSDPVEWTVMDVVEYFTEA-GFPEQATAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPAL 513

  Fly  1355 KLY 1357
            |:|
Human   514 KIY 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093 4/17 (24%)
SAM_PNT 1278..1367 CDD:460486 28/122 (23%)
SAMD1NP_612361.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..247 11/41 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..458 25/183 (14%)
SAM_Atherin-like 459..527 CDD:188982 24/59 (41%)
Blue background indicates that the domain is not in the aligned region.

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