Protein Alignment l(3)mbt and scml4

DIOPT Version :10

• Sequence 1: NP_733209.1
• Gene: l(3)mbt / 43288
• FlyBaseID: FBgn0002441
• Length: 1477
• Species: Drosophila melanogaster
• Sequence 2: XP_001332433.4
• Gene: scml4 / 794170
• ZFINID: ZDB-GENE-041210-338
• Length: 475
• Species: Danio rerio
• Alignment Length: 545
• Identity: 104/545 - (19%)
• Similarity: 154/545 - (28%)
• Gaps: 234/545 - (42%)

  Fly   964 MHLEAEDLNDTGKICVATVTDILDERIRVHFDGWDD-------CYDLWVHITSPYIHPCGWHEGR 1021
            |.|...||.|:....:.:|..:...|:|:..|..||       ..||...:.|          ||
Zfish     1 MRLRGRDLEDSTVSWIPSVLGVQSVRLRLRLDRRDDRGRSLWQLVDLGEEVQS----------GR 55

  Fly  1022 -----------QQLIVPP----------DYQKSAFIWDDYISEVGGMAASKELFTP---RQPMEY 1062
                       |.|:..|          :.|....|...::....|....::...|   |.| ||
Zfish    56 RPRDRTPPTCSQSLMSIPAAPSVQSGGGEMQSPGVISPSFLPPASGKVPGRKRGRPPLKRHP-EY 119

  Fly  1063 QERMKLEVVDQRNPCLIRPATVVTRKG--------YRVQLHLDCWPTEYYFWLEDDSPDLHPIGW 1119
            |.|.         |..:.|..|..::|        .|:...|...|..     ....||:..|..
Zfish   120 QSRY---------PESLPPIKVPKKRGRKPGFKLKSRLMTPLAISPPS-----STPEPDMSSIPQ 170

  Fly  1120 CEATSHELETP---------------------------PGYL---QPKSVMPCDVEGC------- 1147
            ..||.....||                           |.:|   :|..|:...|:||
Zfish   171 DAATIPHSATPQVLTVCIYVNKQVNTGPNLDRQKVLQLPDHLGPARPSVVLQQAVQGCIDSAFQQ 235

  Fly  1148 --------RGFGNAK---RFNLNVHA---------------LRECC------------PYAP--- 1171
                    .|:|..|   .|:...|.               |::.|            |.||
Zfish   236 KAVFTLLTEGYGGEKISATFDGKQHLLSLPVVNSVGYVLRFLKKLCRSLLCENLFSDQPIAPSSS 300

  Fly  1172 ---------ENWRQWRSK-----------TVKPPRVAPENIRRGWAKKTKRACSEAKQAIKEDSQ 1216
                     |.....:||           :|:|.|.:.:....| |..:..|.|:.....:..|.
Zfish   301 PSSSSSFHMEKHSDGQSKSNSMVDDYHGDSVEPKRYSVDPSDFG-AMSSPYAASKPAYGFRSASA 364

  Fly  1217 ------QEIVYPKV-AEVVQAKRKTSPCEEKVVKKQKQMQKEEDAEQV-------PDERSLAIAR 1267
                  ::...|.. .|..::....||                ||.:|       |...|:....
Zfish   365 YSGGICRQAASPSTFPEGNRSAYSPSP----------------DAGEVKPPPSKDPSRWSVDEVV 413

  Fly  1268 SFVKDYGPQFL-PNYRLWQLNSAFKLDDVRTNPLHWTSWDVCEYIERALDSTDIAKVIFEQDIDG 1331
            .|:||..||.| |:..|::                                        :.:|||
Zfish   414 WFIKDADPQALGPHVELFR----------------------------------------KHEIDG 438

  Fly  1332 RALLMLGRKELDTYLKLKVGPAVKL 1356
            .|||:|....:..||.||:|||:||
Zfish   439 DALLLLKSDMIMKYLGLKLGPALKL 463

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(3)mbt	NP_733209.1	PRK10819	<332..>427	CDD:236768
		MBT_L3MBTL1-like_rpt1	846..945	CDD:439091
		MBT_L3MBTL1-like_rpt2	957..1045	CDD:439092	21/108 (19%)
		MBT_L3MBTL1-like_rpt3	1058..1130	CDD:439093	17/79 (22%)
		SAM_PNT	1278..1367	CDD:460486	19/80 (24%)
scml4	XP_001332433.4	PHA03247	<61..170	CDD:223021	23/123 (19%)
		RBR	104..148	CDD:465382	11/53 (21%)
		SLED	185..293	CDD:463469	14/107 (13%)
		SAM_Scm	401..472	CDD:188977	26/103 (25%)