DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and Mbtd1

DIOPT Version :9

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:XP_038943608.1 Gene:Mbtd1 / 688133 RGDID:1592427 Length:719 Species:Rattus norvegicus


Alignment Length:781 Identity:177/781 - (22%)
Similarity:260/781 - (33%) Gaps:314/781 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 ISIIKAESL---PLSRED----FERSLRCDEQVPQTPPKSSSSSSSGSHASEMSPPPKLADPKPS 629
            |:.||.:::   |..:.|    |:....|.|         .:||||.|..||             
  Rat     2 ITAIKKQNILHNPKEKADWFGMFDGYDSCSE---------DTSSSSSSEESE------------- 44

  Fly   630 SPPAKNAKKANDHDANPSPSSKTNDFKKSMMQNLNMLKWRGQQPANLQNSTVRFELNEFNFLQIN 694
                        .:|.|.|:            ||.::|..||                       
  Rat    45 ------------EEAAPLPA------------NLPIIKNNGQ----------------------- 62

  Fly   695 ERCQPRQGPAAYFERPLYDRPGRRPSACVHPLLYLCQRCNFHGPAADFLA--PHFCSVGCVRRSQ 757
                            :|..|..:..      :..|:.|...|....|.:  ..||||.|     
  Rat    63 ----------------VYTYPDGKSG------MATCEMCGMVGVRDAFYSKTKRFCSVSC----- 100

  Fly   758 KRRLPQSTQKESKISRTQLEQTAGTAPDLPQKRQTNYKPHKSLSAIQEQ---------------L 807
            .|....:::|.|.::|.|:               |...|.|....:|:|               |
  Rat   101 SRSYSSNSKKASILARLQV---------------TGKPPTKKAKVLQKQPLVAKLAAYAQYQATL 150

  Fly   808 QQRQKDKPR------KPFRWSEYLKSKGKDVAAPIHLFLN-PF-----PISPNCFEIGMKLEAID 860
            |.:.|.|..      :.|.|..|:.| ...:|||:..|.: |.     .||.|     :::| :.
  Rat   151 QNQAKTKAGNSAISVEGFSWGNYINS-NSFIAAPVACFKHAPMGTCWGDISEN-----VRIE-VP 208

  Fly   861 PENCSL----FCVCSIVEVRGYRLKLSFDGY--SSMYDFWVNADSQDIFPPGWCDETARVLQAPK 919
            ..:|||    |.:..|:::.||...|.::|:  .|..|||.|....||.|.|||..:.:.|..|:
  Rat   209 NTDCSLPTKVFWIAGIIKLAGYNALLRYEGFENDSSLDFWCNICGSDIHPVGWCAASGKPLVPPR 273

  Fly   920 DYNSERFSWSRYLVK--TGGKAAP----------------------------------------- 941
            ....:..:|..:|||  ||.|..|                                         
  Rat   274 TVQHKYTNWKAFLVKRLTGAKTLPPDFPQKVSESMQYPFKPCMRVEVVDKRHLCRTRVAVVESVI 338

  Fly   942 -----------------------RALFGHLNMQQQMDVR-------------------------- 957
                                   ..|..|:...:.:..|                          
  Rat   339 GGRLRLVYEESEDRTDDFWCHMHSPLIHHIGWSRSIGHRFKRSDITKKQDGHFDTPPHLFAKVKE 403

  Fly   958 -----NGFAVGMHLEAEDLNDTGKICVATVTDIL-DERIRVHFDG--------WDDCYDLWVHIT 1008
                 ..|..||.|||.|..:...|||||:..:| |..:.:..||        | .||    |.|
  Rat   404 VDQSGEWFKEGMKLEAIDPLNLSTICVATIRKVLADGFLMIGIDGSEAADGSDW-FCY----HAT 463

  Fly  1009 SPYIHPCGWHEGRQQLIVPP-DYQKSAFIWDDYISEVGGMAASKELFTPRQPME-YQERMKLEVV 1071
            ||.|.|.|:.|.....:.|| .|.|..|.|.||:.|.|.:||..:||....|.. ::..||||.|
  Rat   464 SPSIFPVGFCEINMIELTPPRGYTKLPFKWFDYLRETGSIAAPVKLFNKDVPNHGFRVGMKLEAV 528

  Fly  1072 DQRNPCLIRPATVVTRKGYR-VQLHLDCWPTEYYFWLEDDSPDLHPIGWCEATSHELETPPGYLQ 1135
            |...|.||..|| |||..:| :::|.|.|..||..|::.:||||:|:|||:.|.::|:.|     
  Rat   529 DLMEPRLICVAT-VTRIIHRLLRIHFDGWEEEYDQWVDCESPDLYPVGWCQLTGYQLQPP----- 587

  Fly  1136 PKSVMPCDVEGCRGFGNAKRFNLNVHALRECCPYAPENWRQWRSKTVKPPRVAPENIRRGWAKKT 1200
                                              |.::.|:.:|.:.|..:.|.....:|..||.
  Rat   588 ----------------------------------ASQSSRESQSASSKQKKKAKSQQYKGHKKKR 618

  Fly  1201 K 1201
            |
  Rat   619 K 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 MBT 822..918 CDD:214723 32/107 (30%)
MBT 929..1028 CDD:214723 37/204 (18%)
MBT 1038..1130 CDD:214723 40/93 (43%)
SAM_PNT 1279..1366 CDD:280377
Mbtd1XP_038943608.1 MBT 172..272 CDD:214723 32/106 (30%)
MBT 289..379 CDD:214723 7/89 (8%)
MBT 386..483 CDD:214723 27/101 (27%)
MBT 495..587 CDD:214723 40/92 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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