DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and samd7

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:XP_009296916.2 Gene:samd7 / 563729 ZFINID:ZDB-GENE-070912-549 Length:527 Species:Danio rerio


Alignment Length:153 Identity:41/153 - (26%)
Similarity:66/153 - (43%) Gaps:32/153 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1293 DDVRTNPLHWTSWDVCEYIERALDSTDIAKVIFEQDIDGRALLMLGRKELDTYLKLKVGPAVKLY 1357
            :|:|    .||..||..:|.......:.|:...|..|||..|.:|....|...|.||:|||:|:.
Zfish   387 EDIR----KWTVDDVYSFISEIPSCAEYAQTFKEHMIDGETLPLLTEDHLLDTLGLKLGPALKIR 447

  Fly  1358 SLILNLRIAVVCKFDSKNIELESNTAGPIQREMDTPVSAIKQLPEQSQTNGYKTDHDQELSESGD 1422
            |. |:.|:..:. ::..|:.|              |||.::..||:|      .|...::|...:
Zfish   448 SQ-LSRRLGNMF-YNMMNLPL--------------PVSGLQPPPEKS------VDRSSDISSPLN 490

  Fly  1423 DDDDEDVML----DSDDFLSVKP 1441
            .:..|  ||    |:|...:.:|
Zfish   491 CNSVE--MLSSPRDTDALKAAEP 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093
SAM_PNT 1278..1367 CDD:460486 25/73 (34%)
samd7XP_009296916.2 None
Blue background indicates that the domain is not in the aligned region.

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