DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and sfmbt2

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:XP_005164891.1 Gene:sfmbt2 / 555450 ZFINID:ZDB-GENE-041210-196 Length:861 Species:Danio rerio


Alignment Length:865 Identity:174/865 - (20%)
Similarity:277/865 - (32%) Gaps:327/865 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   819 FRWSEYLKSKGKDVAAPIHLFLNPFPIS-PNCFEIGMKLEAIDPENCSLFCVCSIVEVRGYRLKL 882
            |.|.|||:..|. .||| |.......:| .:.|:.|||||..:..:...:.|.:|:...|..|.|
Zfish    10 FNWEEYLEDTGA-TAAP-HTSFRHVELSLQSSFQPGMKLEVANKGSVDTYWVATIITTCGQLLLL 72

  Fly   883 SFDGYSS--MYDFWVNADSQDIFPPGWCDETARVLQAPKDYN-------SERFS-WSRYLVK--T 935
            .:.||..  ..|||.:..:.::.|.|||.:..:.||.|:| |       .|::| |:.:|:|  |
Zfish    73 RYCGYGEDRKADFWCDVMTAELHPVGWCAQNDKTLQPPED-NVYLRAAIKEKYSDWTEFLIKELT 136

  Fly   936 GGKAAPRALF-GHLNMQQQMDVRNGFAVGMHLEAEDLNDTGKICVATVTDILDERIRVHFDGWDD 999
            |.:.||..|. |.|..:..:|:   ...|..||..|.::........|...:..|:.:.:.|.:|
Zfish   137 GSRTAPANLLEGPLRGKNTVDL---IMEGSILELRDASEPSVYWATQVQRNVGGRLCLSYVGLND 198

  Fly  1000 -CYDLWVHITSPYIHPCGWHEGRQQLIVPP----DYQKSAFIWDDYISEVGGMAASKELFTPRQP 1059
             .|.:|:......:.|.||.:.....:.||    |.:.|: .|...:.|....|.:..|     |
Zfish   199 PSYYMWMFYLDTRLRPLGWAKENNLPMKPPTDLCDLRSSS-EWTTALDEATAEALNNPL-----P 257

  Fly  1060 ME------------YQERMKLEVVDQRNPCLIRPATVV-TRKGYRVQLHLD-------------- 1097
            :|            ::..||||:|....|..|.|.:|. ....|..|:.:|              
Zfish   258 LEVFKDHADLHTHSFRAGMKLEMVSPVEPFHICPVSVTKVYNEYHFQITVDDLTADATPTSAVCH 322

  Fly  1098 -----------------------------------------------CWPTEYY-------FWLE 1108
                                                           |:|....       .|||
Zfish   323 AESPGILPVQWCLKNGVELERPRGFETQDFDWADYLKHTSTEAAPDACFPNASQSRGFCKDMWLE 387

  Fly  1109 DDSP----------------------------------------DLHPIGWCEAT----SHELET 1129
            ..:|                                        ::.|:|||||.    :|.|:|
Zfish   388 AVNPLHPAELCVARITQVKGCLLWLRLEGLTKPLPDCIVDVESMNIFPVGWCEANGYPLTHSLKT 452

  Fly  1130 ------------PPGYLQPK----------SVMPCD---VEG---C-RGFGNAKRFN---LNVHA 1162
                        |...|.|.          |..|.|   |.|   | :.|.|.:.|:   ||...
Zfish   453 VCLPQKKIAVVQPEKQLAPSQSPDIPISLCSSAPMDSGLVNGKYCCSQLFINHRCFSGPYLNKGR 517

  Fly  1163 LRE---------CCPYAPENWRQWRSKTVKPPRV--------------APENIRRGWAKKT---- 1200
            :.|         |.....|......:...||.||              ..|.::..:..|:    
Zfish   518 IAELPKAVGPGKCAVVLKEILTMLINSAYKPGRVLRELQMVEDPQWNCQEETLKAKYKGKSYRST 582

  Fly  1201 --------------KRAC------------------------SEAKQAIKEDSQQEIVYPKVAEV 1227
                          :|.|                        |:.|.......::::..|.:.|.
Zfish   583 MRIVRTADQVSEFCRRVCERLQCCLNLFGPTFVSDKCPENCSSQTKTKYTYYKKRKVGRPSLGEN 647

  Fly  1228 VQAKRKTSPCEEKVVKKQKQMQK--------------------------EEDAEQVPDERSLAIA 1266
            .|....:.|...:..:|...:||                          :||.|:...|.|.:..
Zfish   648 AQDGDLSKPARRRKKRKAIFVQKKRRSSIVGYHTTESPQDSDYNYDEDEDEDFEEWGSEASSSSL 712

  Fly  1267 RSFVKDYGPQFLP-----------------------------------NYRLWQL--NSAFKLDD 1294
            |.....:..  ||                                   :|...|:  ::..|::.
Zfish   713 REEASAHNS--LPRRGRPPRRAALQRRMTHPGSETSDRISPRRTTRSVSYSQNQMARDTNVKMES 775

  Fly  1295 VR--------TNPLHWTSWDVCEYIERALDSTDIAKVIFEQDIDGRALLMLGRKELDTYLKLKVG 1351
            ..        ||||.|:..||.::| .:.|...:||:..||||||:|||:|....:...:.||:|
Zfish   776 TEEEDRLVLDTNPLQWSVSDVVDFI-TSTDCASLAKIFQEQDIDGQALLLLTLPTVQECMDLKLG 839

  Fly  1352 PAVKLYSLILNLRIAVVCKF 1371
            ||:||...|..:::|...::
Zfish   840 PAIKLCHQIERVKVAFYSQY 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091 35/111 (32%)
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092 19/92 (21%)
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093 29/208 (14%)
SAM_PNT 1278..1367 CDD:460486 34/133 (26%)
sfmbt2XP_005164891.1 MBT 37..137 CDD:459242 30/100 (30%)
MBT_SFMBT2_rpt2 156..253 CDD:439104 21/100 (21%)
MBT 270..362 CDD:459242 12/91 (13%)
MBT_SFMBT2_rpt4 379..469 CDD:439108 14/89 (16%)
SLED 498..612 CDD:463469 17/113 (15%)
SAM_Scm-like-4MBT1,2 777..861 CDD:188980 30/84 (36%)
Blue background indicates that the domain is not in the aligned region.

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