DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and l3mbtl3

DIOPT Version :9

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_001232893.1 Gene:l3mbtl3 / 403075 ZFINID:ZDB-GENE-040724-127 Length:523 Species:Danio rerio


Alignment Length:498 Identity:189/498 - (37%)
Similarity:269/498 - (54%) Gaps:55/498 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   676 LQNSTVRFELNEFNFLQ-INERCQPRQGPAAY----FERPL------------YDRP-GRRPSAC 722
            |..|.::|.:|||..|: |.|..:..:|..|:    :..|.            .|.| |:|...|
Zfish    28 LPGSELKFRVNEFGVLEVITEEMEEERGKKAHATTTWSVPTAQEALSEGSVLKQDSPWGQRGLVC 92

  Fly   723 VHPLLYLCQRCNFHGPAADFLAPHF-CSVGCVRRSQKRRLPQSTQKESKI---SRTQLEQTA--- 780
            |        |||..|.|.|||.... ||..|:::.|:....:.::...::   .||:||::|   
Zfish    93 V--------RCNRKGSAVDFLPDGLHCSERCLQQEQEELKTEGSRMNGELLSRKRTRLERSAEDM 149

  Fly   781 GTAPDLPQKRQTNYKPHKSLSAIQEQLQQRQKDK--------------PRKPFRWSEYLKSKGKD 831
            .::.|:|::...:|:..:|....:...:.|:|.:              .:|.:.|:.||:.: :.
Zfish   150 DSSMDIPEEEDEDYEEKESRRPARGATRGRKKRRGDAALLRYTVPYGGKKKAWCWASYLEQE-RA 213

  Fly   832 VAAPIHLF--LNPFPISPNCFEIGMKLEAIDPENCSLFCVCSIVEVRGYRLKLSFDGYSSMYDFW 894
            :|||..||  ...||...|.|.:||:||.||||:.|::||.:|.||.|:|::|.||.:|..||||
Zfish   214 IAAPSKLFKEYQCFPQCKNGFRVGMRLEGIDPEHPSMYCVLTIAEVSGHRIRLHFDHFSDCYDFW 278

  Fly   895 VNADSQDIFPPGWCDETARVLQAPKDYNSERFSWSRYLVKTGGKAAPRALFGHLNMQQQMDVRNG 959
            ||::|.||.|.|||::|...|..||....|.||||.|:.....:.||:|||.:.||..   ..:|
Zfish   279 VNSNSPDIHPVGWCEKTGHKLHPPKGMKDEEFSWSSYIKLNKIQTAPKALFHNQNMTV---TPSG 340

  Fly   960 FAVGMHLEAEDLNDTGKICVATVTDILDERIRVHFDGWDDCYDLWVHITSPYIHPCGW-HEGRQQ 1023
            |.|||.|||....|...||||||||::|.|..||||.|::.||.|...|||||||.|| .|..:.
Zfish   341 FRVGMKLEAVCRKDPTFICVATVTDMVDSRFLVHFDNWEESYDYWCDATSPYIHPVGWCQENGRT 405

  Fly  1024 LIVPPDY-QKSAFIWDDYISEVGGMAASKELFTPRQPMEYQERMKLEVVDQRNPCLIRPATVVTR 1087
            |..||.| ..:.|.|:.|::|...:.|....|..:.|..:|..|||||||:|||.|||.|||...
Zfish   406 LSTPPGYPDANNFSWEKYLAETSSLPAPARAFKVKPPHGFQVNMKLEVVDKRNPVLIRVATVADT 470

  Fly  1088 KGYRVQLHLDCWPTEYYFWLEDDSPDLHPIGWCEATSHELETP 1130
            ..:|:.:|.|.|..||.:|::.||||:||.|||..|.|.|:.|
Zfish   471 DDHRLWIHFDGWTDEYDYWIDADSPDVHPAGWCAKTGHPLQPP 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 MBT 822..918 CDD:214723 46/97 (47%)
MBT 929..1028 CDD:214723 47/99 (47%)
MBT 1038..1130 CDD:214723 41/91 (45%)
SAM_PNT 1279..1366 CDD:280377
l3mbtl3NP_001232893.1 MBT 206..302 CDD:214723 46/96 (48%)
MBT 313..409 CDD:214723 47/98 (48%)
MBT 421..513 CDD:214723 41/91 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583951
Domainoid 1 1.000 93 1.000 Domainoid score I7503
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002225
OrthoInspector 1 1.000 - - otm26339
orthoMCL 1 0.900 - - OOG6_104389
Panther 1 1.100 - - O PTHR12247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1471
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.840

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