DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and ph-p

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_476871.2 Gene:ph-p / 31181 FlyBaseID:FBgn0004861 Length:1589 Species:Drosophila melanogaster


Alignment Length:172 Identity:38/172 - (22%)
Similarity:69/172 - (40%) Gaps:60/172 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 TRRIRLIS-ELSEAD-SILSSYHEGGYKKKPPKIPDGGYGWVIVFSSFMIS--LIMDGV------ 167
            ::::.::| :|||.: .::.|  :.|.:..|.:|  ..|.::..|..|.|:  .|||.:      
  Fly    41 SQKVAIVSTKLSETNYKLICS--KAGVRWNPTQI--SFYDFLKPFELFDITSEQIMDELYKKLID 101

  Fly   168 SFSFGLIYTEL--LDYFGESKSKTAWIGSLFI--------------AVPLLSGPIMSNLVDRYGC 216
            |.:..:::.:|  |:.||.:..:|    ::|:              |:.|.|..|.||.||    
  Fly   102 SSASVILFDDLSILEQFGATSVET----TIFVHKIYTHLKTLSQENALLLASFSIHSNAVD---- 158

  Fly   217 RKMTMLGGFIGGMGFVLASICQSVEQLYFTFGILSGVGLGFG 258
                           :|...|.       .|..:|.|..|||
  Fly   159 ---------------ILKPRCH-------VFVQMSPVSHGFG 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093
SAM_PNT 1278..1367 CDD:460486
ph-pNP_476871.2 DUF5585 1015..>1232 CDD:465521
SAM_Ph1,2,3 1508..1576 CDD:188976
Blue background indicates that the domain is not in the aligned region.

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