DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and PHC2

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_001372041.1 Gene:PHC2 / 1912 HGNCID:3183 Length:881 Species:Homo sapiens


Alignment Length:1008 Identity:192/1008 - (19%)
Similarity:331/1008 - (32%) Gaps:322/1008 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LPLSMASAEAKQLQRNISLSMSPANGGVISPSTANCNGVASASGGNPNPN----SLLTLAPRKEE 62
            ||:...|:.|        .:.|..:|   :.|::.||.  |:|||:..|.    |:.:..|.::.
Human     5 LPVPHTSSSA--------CATSSTSG---ASSSSGCNN--SSSGGSGRPTGPQISVYSGIPDRQT 56

  Fly    63 LRFLP-------------LAPMGGNKTCNITISNVQPMKSKLKSVN------IVPNSIKSAGAGA 108
            ::.:.             |..|...:..::.:......:..|.|..      :...|:.|...|:
Human    57 VQVIQQALHRQPSTAAQYLQQMYAAQQQHLMLQTAALQQQHLSSAQLQSLAAVQQASLVSNRQGS 121

  Fly   109 TVG---SADAPL----FQLVPSPS-----NPSQPLVAILAPN--RKTTLLGGGASNGQPVVIRSG 159
            |.|   ||.||.    ..|..||:     |.:|.:.:..|..  ::..|||..:|   |.:..|.
Human   122 TSGSNVSAQAPAQSSSINLAASPAAAQLLNRAQSVNSAAASGIAQQAVLLGNTSS---PALTASQ 183

  Fly   160 TPLHKNSLTVETSNKPIQPGGSAAAAAVGGGTGGAPLTLVGKTVVPPKIQAATPVQIPSTGPGAQ 224
            ..::..:       :..|||.....|...|||  .||:  .:.:..|....|| || |..|.|  
Human   184 AQMYLRA-------QMAQPGNLVQVARSLGGT--VPLS--PQLIFTPTATVAT-VQ-PELGTG-- 233

  Fly   225 VSLLANPLKPRAPLILSKVAVDKLRLKFSQVKSNPNALVLGKANH---VKKLLTSPNPSGEDKTR 286
                 :|.:|..|     ..|..|.|:..|   .|.|...|....   :..|...|.|.|.....
Human   234 -----SPARPPTP-----AQVQNLTLRTQQ---TPAAAASGPTPTQPVLPSLALKPTPGGSQPLP 285

  Fly   287 S-TQKNNKQNTSASQLKPVVAPKTAMPIA-----TEVPTADNNKMSLIKSKPVAIKAVPLPSQEA 345
            : .|..|....|.:..||.:|.....|..     :.||.:...:..|.::.| |:.|.||     
Human   286 TPAQSRNTAQASPAGAKPGIADSVMEPHKKGDGNSSVPGSMEGRAGLSRTVP-AVAAHPL----- 344

  Fly   346 PIVPAVAPVVTSPEKVDVKPTAK---PSIKTAPKPTPKPLEMSVNGPAKEKKAP---AKEQKQKT 404
             |.||.|.:  .|.::..:|::|   |......:|.|:..:     |..::..|   |:...|..
Human   345 -IAPAYAQL--QPHQLLPQPSSKHLQPQFVIQQQPQPQQQQ-----PPPQQSRPVLQAEPHPQLA 401

  Fly   405 MDKPPVVKE---------IAQHTPCGPKELPKLKRSKSFVSN--HPASP-----------VANNE 447
            ...|.|..:         :...||..|.:.|.....|...|.  ||.:|           |.:..
Human   402 SVSPSVALQPSSEAHAMPLGPVTPALPLQCPTANLHKPGGSQQCHPPTPDTGPQNGHPEGVPHTP 466

  Fly   448 RR---HSVAIMAKEVDVIEQPSAAIETITIEDD--DESEEEQQKPEIKKTPKQNQKPEKQEAPKK 507
            :|   |:.|::.:     .||::.:....:.||  :.:..|:..||.:..|..:|          
Human   467 QRRFQHTSAVILQ-----LQPASPVPQQCVPDDWKEVAPGEKSVPETRSGPSPHQ---------- 516

  Fly   508 KQIPMPILPAGITISTTSTAKKKAVRKNSSVTTISSSSSDSSSYSDVEVVPTKKTEKELSMLPGI 572
             |..:..:|.|:.:.|:...:.....:...  .|..:.:|.||                   ||:
Human   517 -QAIVTAMPGGLPVPTSPNIQPSPAHETGQ--GIVHALTDLSS-------------------PGM 559

  Fly   573 SIIKAESLPLSREDFERSLRCDEQVPQTPPKSSSSSSSGSHASEMSPPPKLADPKPSSPPAKNAK 637
            :.....|                        :||.:.:.....|..||..:..|:..:...:.. 
Human   560 TSGNGNS------------------------ASSIAGTAPQNGENKPPQAIVKPQILTHVIEGF- 599

  Fly   638 KANDHDANPSPSSKTNDFKKSMMQNLNMLKWRGQQPANL--QNSTVRFELNEFNFLQINERCQPR 700
             .....|.|.|..:::    .::.||.....:|..|..|  |:.|...:                
Human   600 -VIQEGAEPFPVGRSS----LLVGNLKKKYAQGFLPEKLPQQDHTTTTD---------------- 643

  Fly   701 QGPAAYFERPLYDRPGRRPSACVHPLLYLCQRCNFHGPAADFL-----APHFCSVGCVR------ 754
                :..|.| |.:..:...|   ||...|:.|.    ..||.     :..|||:.|.:      
Human   644 ----SEMEEP-YLQESKEEGA---PLKLKCELCG----RVDFAYKFKRSKRFCSMACAKRYNVGC 696

  Fly   755 ----------RSQKRRLPQSTQKESKISRTQL--------EQTAGTAP-------DLPQKRQ--- 791
                      ||:.::...:|....:.|:..|        :|..||.|       .|...::   
Human   697 TKRVGLFHSDRSKLQKAGAATHNRRRASKASLPPLTKDTKKQPTGTVPLSVTAALQLTHSQEDSS 761

  Fly   792 -----TNY-KPHKSLSAIQEQLQQRQKDK--------------------PRKPFRWS-----EYL 825
                 ::| :|...:||.....::||..:                    |.:|.:|:     |::
Human   762 RCSDNSSYEEPLSPISASSSTSRRRQGQRDLELPDMHMRDLVGMGHHFLPSEPTKWNVEDVYEFI 826

  Fly   826 KSKGKDVAAPIHLFLNPFPISPNCFEIGMKLEA 858
            :|                  .|.|.||..:..|
Human   827 RS------------------LPGCQEIAEEFRA 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768 24/109 (22%)
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091 5/13 (38%)
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093
SAM_PNT 1278..1367 CDD:460486
PHC2NP_001372041.1 PHA03247 <116..571 CDD:223021 117/560 (21%)
PHC2_SAM_assoc 693..812 CDD:465202 16/118 (14%)
SAM_Ph1,2,3 812..880 CDD:188976 9/48 (19%)
Blue background indicates that the domain is not in the aligned region.

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