DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and SAMD11

DIOPT Version :9

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_001372569.1 Gene:SAMD11 / 148398 HGNCID:28706 Length:845 Species:Homo sapiens


Alignment Length:1187 Identity:207/1187 - (17%)
Similarity:341/1187 - (28%) Gaps:485/1187 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 MP-IATEVPTADNNKMSLIKSKPVAIKAVPLPSQEAPIVPAVAPVVTSPEKVDVKPTAKPSIKTA 374
            || :..|.|..::..::|....| .:.|:|||    |:...:||:   |....:.|.|       
Human     1 MPAVKKEFPGREDLALALATFHP-TLAALPLP----PLPGYLAPL---PAAAALPPAA------- 50

  Fly   375 PKPTPKPLEMSVNGPAKEKKAPAKEQKQKTMDKPPVVKEIAQHTPCGPKELPKLKRSKSFVSNHP 439
                               ..||.....:.:..||                  |:..::::|.|.
Human    51 -------------------SLPASAAGYEALLAPP------------------LRPPRAYLSLHE 78

  Fly   440 ASPVAN-------NERRHSVAIMAKEVD-VIEQPSAAIETITIEDDDESEEEQQKPEIKKTPKQN 496
            |:|..:       .||..:.|..|.:.. :::.....||.       |....:....::|..:.:
Human    79 AAPHLHLPRDPLALERFSATAAAAPDFQPLLDNGEPCIEV-------ECGANRALLYVRKLCQGS 136

  Fly   497 QKPEKQE-----APKKKQIPMPILPAGITISTTSTAK--KKAVR-KNSSVTTISSSSSDSSSYSD 553
            :.|..:.     .|.:.|.          :|...|||  |:::| |..|:.|:.|...       
Human   137 KGPSIRHRGEWLTPNEFQF----------VSGRETAKDWKRSIRHKGKSLKTLMSKGI------- 184

  Fly   554 VEVVPTKKTEKELSMLPGISIIKAESLPLSREDFERSLRCDEQVPQTPPKSSSSSSSGSHASEMS 618
            ::|.|      .:...||..|    |.|::|                                  
Human   185 LQVHP------PICDCPGCRI----SSPVNR---------------------------------- 205

  Fly   619 PPPKLADPKP-SSPPAKNAKK-------ANDHDANPS-------PSSKTND------FKKSMMQ- 661
              .:|||.:. :.|.|:|.||       |:|.|::.|       |..|..|      .|:.:.. 
Human   206 --GRLADKRTVALPAARNLKKERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRRVHTH 268

  Fly   662 ---NLNMLKWRGQQPANLQNSTVRFELNEFNFLQINE---RCQPRQGPAAYFERPLYD----RPG 716
               |::..:....|..||  .|:...::....|.:.|   ||:.::|......||..|    |.|
Human   269 WDVNISFREASCSQDGNL--PTLISSVHRSRHLVMPEHQSRCEFQRGSLEIGLRPAGDLLGKRLG 331

  Fly   717 RRP---SACVHPLLYLCQRCNFHGPAAD-FLAPHFCSVGCVRRSQKRRLPQSTQKES-------- 769
            |.|   |.|     :..:|.....|.|: .|.|.............|||..:..:.|        
Human   332 RSPRISSDC-----FSEKRARSESPQAEALLLPRELGPSMAPEDHYRRLVSALSEASTFEDPQRL 391

  Fly   770 ---------------KISRTQLEQTAGTAPDLP-----QKRQTNYKPHKSLSAIQEQLQQRQKDK 814
                           :::...|...:|....||     |:|:.....|:..:|........:::.
Human   392 YHLGLPSHDLLRVRQEVAAAALRGPSGLEAHLPSSTAGQRRKQGLAQHREGAAPAAAPSFSEREL 456

  Fly   815 PRKPFRWSEYLKSKGKDVAAPIHLFLNPFPISPNCFEIGMKLEAIDPENCSLFCVCSIVEVRGYR 879
            |:.|                         |:             :.|:|.....:       |..
Human   457 PQPP-------------------------PL-------------LSPQNAPHVAL-------GPH 476

  Fly   880 LKLSFDGYSSM------YDFWVNADSQDIFPPGWCDETARVLQAPKDYNSERFSWSRYLVKTGGK 938
            |:..|.|..|.      |.|         .||.               .:|.|:|.:.|::. ..
Human   477 LRPPFLGVPSALCQTPGYGF---------LPPA---------------QAEMFAWQQELLRK-QN 516

  Fly   939 AAPRALFGHLNMQQQMD------VRNGFAVGMHLEAEDLNDTGKICVATVTDILDERIRVHFDGW 997
            .|...|...|..|::::      :....|:..:..||:|...|.:.|..                
Human   517 LARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQRRGALLVLN---------------- 565

  Fly   998 DDCYDLWVHITSPYIHPCGWHEGRQQLIVPPDYQKSAFIWDDYISEVGGMAASKELF--TPRQ-- 1058
                                |.....|.:||.....:          |....|::..  .||:  
Human   566 --------------------HGAAPLLALPPQGPPGS----------GPPTPSRDSARRAPRKGG 600

  Fly  1059 PMEYQERMKLEVVDQRNPCLIRPATVVTRKGYRVQLHLDCWPTEYYFWLEDDSPDLHPIGWCEAT 1123
            |               .|...||:......|.|:             |.:|.|.|..|   .::.
Human   601 P---------------GPASARPSESKEMTGARL-------------WAQDGSEDEPP---KDSD 634

  Fly  1124 SHELETPPGYLQPKSVMPCDVEGCRGFGNAKRFNLNVHALRECCPYAPENWRQWRSKTVKPPRVA 1188
            ..:.||.             ..||||                                 ..|..|
Human   635 GEDPETA-------------AVGCRG---------------------------------PTPGQA 653

  Fly  1189 PENIRRGWAKKTKRACSEAKQAIKEDSQQEIVYPKVAEVVQAKRKTSPCEEKVVKKQKQMQKEED 1253
            |..          .|.:|.| .:...|...:.:|..         .||...........|    |
Human   654 PAG----------GAGAEGK-GLFPGSTLPLGFPYA---------VSPYFHTGAVGGLSM----D 694

  Fly  1254 AEQVPDERSLAIARSFVKDYGPQFLPNYRLWQLNSAFKLDDVRTNPLHWTSWDVCEYIERALDST 1318
            .|:.|               .|                 :||    ..||..|||.::.......
Human   695 GEEAP---------------AP-----------------EDV----TKWTVDDVCSFVGGLSGCG 723

  Fly  1319 DIAKVIFEQDIDGRALLMLGRKELDTYLKLKVGPAVKLYSLILNL--RIAVVCKFDSKNIELESN 1381
            :..:|..||.|||..|.:|..:.|.|.:.||:|||:|:.:.:...  |:..|..|... :.|:..
Human   724 EYTRVFREQGIDGETLPLLTEEHLLTNMGLKLGPALKIRAQVARRLGRVFYVASFPVA-LPLQPP 787

  Fly  1382 TAGPIQREMDT---PVS 1395
            |....:||:.|   |:|
Human   788 TLRAPERELGTGEQPLS 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 MBT 822..918 CDD:214723 12/101 (12%)
MBT 929..1028 CDD:214723 13/104 (13%)
MBT 1038..1130 CDD:214723 16/95 (17%)
SAM_PNT 1279..1366 CDD:280377 24/88 (27%)
SAMD11NP_001372569.1 SAND 113..185 CDD:396076 17/95 (18%)
SAM_Samd7,11 704..771 CDD:188978 22/70 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149830
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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