DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and L3mbtl4

DIOPT Version :9

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:XP_038940738.1 Gene:L3mbtl4 / 103690158 RGDID:1587524 Length:613 Species:Rattus norvegicus


Alignment Length:639 Identity:207/639 - (32%)
Similarity:306/639 - (47%) Gaps:108/639 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   790 RQTNYKPHKSLSAIQEQLQQ------RQKDKP---------------RKPFRWSEYLKSKGKDVA 833
            ||.|.|...|:::.:...|.      .::.||               ::.:.|.:||: :|..||
  Rat     2 RQPNRKRKLSMASTEHMNQDGRMGQTEEETKPGDGATPSGRESSVTTQETWSWEQYLR-EGNAVA 65

  Fly   834 APIHLFL--NPFPISPNCFEIGMKLEAIDPENCSLFCVCSIVEVRGYRLKLSFDGYSSMYDFWVN 896
            ||:.||.  ..||...|.|::||:||.||....|:|||.|:.||.||||:|.||||.|.||||.|
  Rat    66 APVELFSKDQSFPEHENGFQVGMRLEGIDARRPSVFCVLSVAEVCGYRLRLHFDGYLSCYDFWTN 130

  Fly   897 ADSQDIFPPGWCDETARVLQAPKDYNSERFSWSRYLVKTGGKAAPRALFGHLNMQQQMDVRNGFA 961
            |.|.||.|.|||.:|...|..|:||..::|.|..||.....:.||:.||  .|......|...|.
  Rat   131 AGSPDIHPVGWCQKTKHELHIPRDYRKDKFVWMDYLKACRLQNAPKKLF--RNRSSNGPVPKEFQ 193

  Fly   962 VGMHLEAEDLNDTGKICVATVTDILDERIRVHFDGWDDCYDLWVHITSPYIHPCGW-HEGRQQLI 1025
            |||.:||.|..:...:|||||.||:::|:|||.|.|||.:|.|..::||.|.|.|| .|..:.|:
  Rat   194 VGMKVEAVDRRNPCLMCVATVADIVEDRVRVHSDSWDDSFDYWCDVSSPCIQPVGWCQENGRNLV 258

  Fly  1026 VPPDYQ-KSAFIWDDYISEVGGMAASKELFTPRQPMEYQERMKLEVVDQRNPCLIRPATVVTRKG 1089
            .||.|. ...|.|.||:......|...:.|..|.|..:...:|||.||:|||.|||.|||.....
  Rat   259 TPPGYPGPDKFSWADYLQATQAKAVPAKAFNTRAPHGFLPNLKLEAVDKRNPRLIRVATVTDVDD 323

  Fly  1090 YRVQLHLDCWPTEYYFWLEDDSPDLHPIGWCEATSHELETPPGYLQPKSVMP----CDVEGCRGF 1150
            |||::|.|.|..:|.:|::.||.|:||||||:.|.|.||.|.|....| ::|    |...||||.
  Rat   324 YRVKIHFDGWDHKYDYWMDADSQDIHPIGWCDVTGHPLEVPYGSEHVK-ILPGQPSCPTPGCRGI 387

  Fly  1151 GNAKRFNLNVHALRECCPYAPENWRQWRSKTVKPPRVAPENIRRGWAKKTKRACSEAKQAIKEDS 1215
            |:.:......|.....|||:..|.:                                ::|..:| 
  Rat   388 GHIRGPRYAGHHSAFGCPYSDVNLK--------------------------------REAALQD- 419

  Fly  1216 QQEIVYPKVAEVVQAKRKTSP----------------CEE-----KVVKKQKQMQ---------- 1249
                   ::.|..||..:..|                |||     ::|::.|.::          
  Rat   420 -------RLREQTQANLEFDPSHSKSENLCNLNFNGKCEEVDSECRLVQQAKCLKIKGREDTDLD 477

  Fly  1250 ---KEEDAEQVPDERSLAIARSFVKDYGPQFLPNYRLWQLNSAFKLDDVRTNPL-HWTSWDVCEY 1310
               :|..|.||.......::.:.:..:..:.||..|.........:.|::.:.: .||..:|.|:
  Rat   478 NLFREYSASQVQQMLHQPLSMTSMSAHPFRDLPLGREQHCKLLPGVADIQASEVARWTVDEVAEF 542

  Fly  1311 IERALDSTDIAKVIFEQDIDGRALLMLGRKELDTYLKLKVGPAVKLYSLILNLR 1364
            ::..|...:.||...::.|||:|.|:|.:.::...:::|:|||:|:|:.||..|
  Rat   543 VQSLLGCEEHAKCFKKEQIDGKAFLLLTQADIVKVMRIKLGPALKIYNSILMFR 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 MBT 822..918 CDD:214723 51/97 (53%)
MBT 929..1028 CDD:214723 40/99 (40%)
MBT 1038..1130 CDD:214723 41/91 (45%)
SAM_PNT 1279..1366 CDD:280377 25/87 (29%)
L3mbtl4XP_038940738.1 MBT 55..149 CDD:214723 50/94 (53%)
MBT 164..260 CDD:214723 40/97 (41%)
MBT 273..364 CDD:214723 41/90 (46%)
zf-C2HC 378..407 CDD:396216 9/28 (32%)
SAM_Scm-like-3MBT3,4 531..596 CDD:188981 21/64 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I7063
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002225
OrthoInspector 1 1.000 - - otm45491
orthoMCL 1 0.900 - - OOG6_104389
Panther 1 1.100 - - LDO PTHR12247
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1471
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.910

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