DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and sfmbt1

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_001361769.1 Gene:sfmbt1 / 100145310 XenbaseID:XB-GENE-984810 Length:842 Species:Xenopus tropicalis


Alignment Length:849 Identity:176/849 - (20%)
Similarity:272/849 - (32%) Gaps:334/849 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   819 FRWSEYLKSKGKDVAAPIHLFLNPFPISPNCFEIGMKLEAIDPENCSLFCVCSIVEVRGYRLKLS 883
            |.|.|||:..| .:|||...|.:......|....||:||........::.:.:|:...|..|.|.
 Frog    20 FNWEEYLEETG-CIAAPHSFFKHVDTSLKNGLSPGMRLEVPHGTESQVYWIANIITTCGKLLLLR 83

  Fly   884 F--DGYSSMYDFWVNADSQDIFPPGWCDETARVLQAPKDYNSERFSWSRYLVK--TGGKAAPRAL 944
            :  .|.....|||.:..:.|:.|.||..:..:.|:.|:....:..:|..:|.:  ||..:||..|
 Frog    84 YLGCGEDRSADFWCDMVTSDLHPLGWAQQNGKSLRPPEGIREKLQNWEEFLAENSTGVSSAPAHL 148

  Fly   945 F-GHLNMQQQMDVRNGFAVGMHLEAEDLNDTGKICVATVTDILDE---RIRVHFDGWDDCYDLWV 1005
            . |....:..:|:   |..|..||.:...|:   .||....:|:.   |:::.::|..||  :|:
 Frog   149 LEGPHRGKDPLDL---FGPGSKLELQHCRDS---IVAWPVRVLENTGGRLQLQYEGVSDC--VWL 205

  Fly  1006 HITSPYIHPCGW---HE------------------------------------------------ 1019
            ....|.:|..||   |:                                                
 Frog   206 FYLHPSLHQVGWAAQHKYDMQPPQAISHLKSEEEWKEILTKWETDPGDCVPAEFFQEQLPLPVHS 270

  Fly  1020 --------------------------------------------------------------GRQ 1022
                                                                          |..
 Frog   271 FLAGMKVEALDPSNPSCFMPATVTKVFSERYFMIEFDDLRPLDSKTSRPLLCHCNSTGIISVGSS 335

  Fly  1023 Q-----LIVPPDYQKSAFIWDDYISEVGGMAASKELFTPRQPME---YQERMKLEVVD---QRNP 1076
            |     |..||.|.:..|.||.|:::..|.||.:..|...||..   :||:||||.|:   |.:.
 Frog   336 QKMGVPLRPPPGYSEEEFDWDKYLTQCEGSAAPESNFPMPQPQSDHVFQEQMKLEAVNPFQQEDI 400

  Fly  1077 CLIRPATVVTRKGYRVQLHL--------DCWPTEYYFWLEDDSPDLHPIGWCEATSHELETPP-- 1131
            |:   |||....|..::|.|        :|       .:..:|.|:.|:||||...|.|..||  
 Frog   401 CI---ATVTQVMGPYIRLQLEGSKLPIAEC-------IVHVESMDIFPMGWCETNGHLLCAPPRT 455

  Fly  1132 GYLQPKSVMPCDVE-------GCRGFGNAK----RFNLNVHALRECCPYAPENWRQWRSKTVKPP 1185
            ....||..:....|       ...|....:    :||.|...|   ||....|.|.:....:...
 Frog   456 KVSPPKETVTTQHEKPIPSSKNVNGLSTTEPAPCKFNSNGKYL---CPKIYFNHRCFSGPYLNKG 517

  Fly  1186 RVA--PENIRRG---------------WAKKTKRACSEAKQAIKEDSQQEIVYPKVAEVVQAK-- 1231
            |:|  |:::..|               .|.|..|...|.:  ::|||.    :|:..|.::||  
 Frog   518 RIAELPKSVGPGSCVLVLKEVLSLLINAAYKPSRVLRELE--LQEDSS----WPQHTETIKAKYK 576

  Fly  1232 ---------------------RKT-----------------SPCEEK------------------ 1240
                                 |||                 ..|.|.                  
 Frog   577 GKTYRSTVELVRTSDQVPDFCRKTCLKLECCPNLFGPQMVLDQCSENCSVLTKTKYTHYYGKRRG 641

  Fly  1241 ------------------------------VVKKQKQM---------------QKEEDAEQVPD- 1259
                                          .|.|:|:|               .:|||.|...| 
 Frog   642 KNLTNPTGILRSIEAALKKPAKKRRRRKNFFVHKKKRMSTSVDNTPGGSPQGSDEEEDEEDEDDS 706

  Fly  1260 ------------------------ERSLAIARSFVKDYGPQFLPNYRLWQLNSAFKLDD---VRT 1297
                                    |.||    |..|.....|..|.:|...:...:|.:   :.:
 Frog   707 HSKDQQEGSEISGKGSSSTSPTRSEHSL----STEKKRSHLFSDNEKLLTKDIRIELKEPLILDS 767

  Fly  1298 NPLHWTSWDVCEYIERALDSTDIAKVIFEQDIDGRALLMLGRKELDTYLKLKVGPAVKLYSLILN 1362
            :||.||..||.:|| ::.|..::||...||:|||:|||:|....:...:.||:..||:|...|..
 Frog   768 SPLDWTVNDVIQYI-KSTDCANLAKHFQEQEIDGKALLLLTLPAVQDCMDLKLAAAVRLCYHIER 831

  Fly  1363 LRIA 1366
            :::|
 Frog   832 VKLA 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091 25/102 (25%)
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092 28/208 (13%)
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093 27/85 (32%)
SAM_PNT 1278..1367 CDD:460486 30/92 (33%)
sfmbt1NP_001361769.1 MBT_SFMBT1_rpt1 47..140 CDD:439101 21/92 (23%)
MBT_SFMBT1_rpt2 159..253 CDD:439103 19/101 (19%)
MBT_SFMBT_rpt3 271..362 CDD:439085 10/90 (11%)
MBT 381..470 CDD:459242 29/98 (30%)
SLED 499..614 CDD:463469 22/120 (18%)
SAM_superfamily 758..842 CDD:472832 28/79 (35%)
Blue background indicates that the domain is not in the aligned region.

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