DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIA-L and toa1

DIOPT Version :9

Sequence 1:NP_476995.1 Gene:TfIIA-L / 43284 FlyBaseID:FBgn0011289 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_595670.1 Gene:toa1 / 2540632 PomBaseID:SPBC28F2.09 Length:369 Species:Schizosaccharomyces pombe


Alignment Length:425 Identity:107/425 - (25%)
Similarity:170/425 - (40%) Gaps:132/425 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVYHAVIEDVITNVRDAFLDEGVDEQVLQEMKQVWRNKLLASKAVE------------------- 55
            :|||.||.|||.|.|..|.:.|||:..|:|::.:|::||:|:....                   
pombe     8 EVYHHVILDVIANSRSDFEENGVDDATLRELQNLWQSKLVATDVATFPWAQAPVGTFPIGQLFDP 72

  Fly    56 ---LSPDSGDGSHPPPIVANNPKSHKAANAKAKKAAAATAVTSHQHIGGNSSMSSLVGLKSSAGM 117
               |..||.|.:  .|.|||:|..:   |..|.:|.......:.||  |||              
pombe    73 VSGLRTDSLDVT--APAVANSPILN---NIAAIRAVQQMDTFAQQH--GNS-------------- 116

  Fly   118 AAGSGIRNGLVPIKQEVNSQNPP-PLHPTSAASMMQKQQQAASSGQGSIPIVATLDPNRIMPVNI 181
                             |..:|| |..|.||.::        |....:||.|.: :||.      
pombe   117 -----------------NYYSPPTPSLPQSATNI--------SFDSSAIPNVQS-NPNN------ 149

  Fly   182 TLPSPAGSASSESRVLTIQVPASALQENQLTQILTAHLISSIMSL---------PTTLASSVLQQ 237
            |.|.|:.|::|      :|:|.:...:   :.|:..|..:::.|.         .|.....:|..
pombe   150 TAPFPSYSSNS------LQLPTNQTAD---SPIINDHSTANVTSTGQEHAPDSSSTNSFGGLLLP 205

  Fly   238 HVN----AALSSANHQKTLAA-----AKQLDGALDSSDEDES------------EESDDNIDN-- 279
            :.|    :.|.......|..|     ..|.|||:...|:..|            :::|..|..  
pombe   206 NQNSPKKSELGETESSNTTPANSRNDVPQTDGAIHDLDDAGSPSNFESNRFAIAQKADAEIYEVL 270

  Fly   280 ------DDDDDLDKDDDEDAEHEDAAEEEPLNSEDDVTDEDSAEMFDTDN-------VIVCQYDK 331
                  ..|..::.::||.....|...:|.:||  |:.|.||.|..:|:.       :::|.|||
pombe   271 KKNRILQIDGTIEDNEDEKKPPVDTPSDEAINS--DLDDPDSDEAPETEEGSDIGQAIVLCLYDK 333

  Fly   332 ITRSRNKWKFYLKDGIMNMRGKDYVFQKSNGDAEW 366
            :...:||||...:||::.:.||||:|.|:||:.||
pombe   334 VNHHKNKWKCVFRDGVVGVNGKDYLFFKANGEFEW 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIA-LNP_476995.1 TFIIA_alpha_beta_like 8..>62 CDD:199899 23/73 (32%)
TFIIA 11..366 CDD:281188 105/422 (25%)
TFIIA_alpha_beta_like <306..366 CDD:199899 25/66 (38%)
toa1NP_595670.1 TOA1 1..369 CDD:227478 107/425 (25%)
TFIIA 9..368 CDD:281188 105/422 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2652
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 99 1.000 Inparanoid score I1668
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002746
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12694
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1533
SonicParanoid 1 1.000 - - X1433
TreeFam 1 0.960 - -
88.040

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