DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIA-L and LOC110438457

DIOPT Version :9

Sequence 1:NP_476995.1 Gene:TfIIA-L / 43284 FlyBaseID:FBgn0011289 Length:366 Species:Drosophila melanogaster
Sequence 2:XP_021326601.1 Gene:LOC110438457 / 110438457 -ID:- Length:141 Species:Danio rerio


Alignment Length:79 Identity:21/79 - (26%)
Similarity:28/79 - (35%) Gaps:9/79 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 NSQNP--PPLHPTSAASMMQKQQQAASSGQGSIPIVATLDPNRI--MPVNITLPSPAGSASSESR 195
            ||..|  || .|...|.....:..:||:..|..    |||....  .||:.:..:||......|.
Zfish    54 NSTAPACPP-DPAPPALQTPPEPSSASASPGEF----TLDGIEFSPQPVDASSHTPAQHCGYSSF 113

  Fly   196 VLTIQVPASALQEN 209
            :.........||.|
Zfish   114 LKERDADPPDLQNN 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIA-LNP_476995.1 TFIIA_alpha_beta_like 8..>62 CDD:199899
TFIIA 11..366 CDD:281188 21/79 (27%)
TFIIA_alpha_beta_like <306..366 CDD:199899
LOC110438457XP_021326601.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1443035at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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