DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and RIPK1

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001341859.1 Gene:RIPK1 / 8737 HGNCID:10019 Length:671 Species:Homo sapiens


Alignment Length:314 Identity:89/314 - (28%)
Similarity:136/314 - (43%) Gaps:64/314 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 LENATDGWSPDNRLGQGGFGDVYRGKWKQLDVAIKVMNYRSPN-IDQKMVELQQSYNELKYLNSI 269
            ||:|        .|..||||.|.....:...:.|....|:.|| |:.....|:    |.|.:|.:
Human    18 LESA--------ELDSGGFGKVSLCFHRTQGLMIMKTVYKGPNCIEHNEALLE----EAKMMNRL 70

  Fly   270 RHDNILALYGYSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFL 334
            ||..::.|.|..|:.||..||.:.|:.|:|...|:| :...||..     :..|.|....|:.:|
Human    71 RHSRVVKLLGVIIEEGKYSLVMEYMEKGNLMHVLKA-EMSTPLSV-----KGRIILEIIEGMCYL 129

  Fly   335 HTARGTPLIHGDIKPANILLDQCLQPKIGDFGL----------------VREGPKSLDAVVEVNK 383
            |   |..:||.|:||.|||:|.....||.|.||                :||    :|...:.|.
Human   130 H---GKGVIHKDLKPENILVDNDFHIKIADLGLASFKMWSKLNNEEHNELRE----VDGTAKKNG 187

  Fly   384 VFGTKIYLPPEFRN--FRQLSTGVDVYSFGIVLLEVFTGRQVTDRVP-ENE-TKKNLLDYVKQQW 444
              ||..|:.||..|  ..:.:...|||||.:||..:|..::     | ||. .::.|:..:|...
Human   188 --GTLYYMAPEHLNDVNAKPTEKSDVYSFAVVLWAIFANKE-----PYENAICEQQLIMCIKSGN 245

  Fly   445 RQNRMELLEKHLAAPMGKELDMCMCAIEAGLHCTALDPQDRPSMNAVLKRFEPF 498
            |.:..::.|   ..|  :|:...|..      |...:|:.||:...:.::|.||
Human   246 RPDVDDITE---YCP--REIISLMKL------CWEANPEARPTFPGIEEKFRPF 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021
STKc_IRAK 219..498 CDD:270968 84/299 (28%)
TyrKc 219..495 CDD:197581 83/296 (28%)
RIPK1NP_001341859.1 STKc_RIP1 23..290 CDD:270929 86/301 (29%)
Interaction with SQSTM1. /evidence=ECO:0000269|PubMed:10356400 290..582
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..354
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..458
RIP homotypic interaction motif (RHIM). /evidence=ECO:0000269|PubMed:11734559, ECO:0000269|PubMed:29681455 531..547
Death_RIP1 583..668 CDD:260048
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.