back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment pll and AT1G66880

DIOPT Version :9

Sequence 1:	NP_001263008.1	Gene:	pll / 43283	FlyBaseID:	FBgn0010441	Length:	501	Species:	Drosophila melanogaster
Sequence 2:	NP_176860.2	Gene:	AT1G66880 / 843006	AraportID:	AT1G66880	Length:	1296	Species:	Arabidopsis thaliana

Alignment Length:	373	Identity:	116/373 - (31%)
Similarity:	189/373 - (50%)	Gaps:	46/373 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly   127 KYIPRSVPTISELRAAPDSSAKVNNGPPFPSSSGVSNSNNNRTSTTATEEIPSLESLGNIHISTV 191
            :|..:|:|..|  .::.|:|..       |:|:.:|:|:|:..       :||:.:|.|
plant   905 QYTSKSLPITS--YSSRDTSRN-------PTSTTISSSSNHSL-------LPSISNLAN------ 947

  Fly   192 QRAAESLLEI-DYAELENATDGWSPDNRLGQGGFGDVYRGKWKQ-LDVAIKVMNYRSPNIDQKMV 254
             |:....::: .|.|||.||:.:|  ..||.||||.||.|..|. ..||:|.:..||      :.
plant   948 -RSDYCGVQVFSYEELEEATENFS--RELGDGGFGTVYYGVLKDGRAVAVKRLYERS------LK 1003

  Fly   255 ELQQSYNELKYLNSIRHDNILALYGYSIKGGKP-CLVYQLMKGGSLEARLRAHKAQ-NPLPALTW 317
            .::|..||::.|.|::|.|::.|||.:.:..:. .|||:.:..|:|...|..::|: .|   |.|
plant  1004 RVEQFKNEIEILKSLKHPNLVILYGCTSRHSRELLLVYEYISNGTLAEHLHGNRAEARP---LCW 1065

  Fly   318 QQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREGPKSLDAVVEVN 382
            ..|.:|::.||..:.||| .:|  :||.|||..|||||...|.|:.||||.|..|  :|......
plant  1066 STRLNIAIETASALSFLH-IKG--IIHRDIKTTNILLDDNYQVKVADFGLSRLFP--MDQTHIST 1125

  Fly   383 KVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVTDRVPENETKKNLLDYVKQQWRQN 447
            ...||..|:.||:....||:...||||||:||.|:.:.::..| :..:....||.:....:.:.|
plant  1126 APQGTPGYVDPEYYQCYQLNEKSDVYSFGVVLTELISSKEAVD-ITRHRHDINLANMAVSKIQNN 1189

  Fly   448 RM-ELLEKHLAAPMGKELDMCMCAI-EAGLHCTALDPQDRPSMNAVLK 493
            .: ||::..|......|:...|.|: |....|...:...||:|:.:::
plant  1190 ALHELVDSSLGYDNDPEVRRKMMAVAELAFRCLQQERDVRPAMDEIVE 1237

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.