DRSC/TRiP Functional Genomics Resources

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Protein Alignment pll and AT1G56130

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_176009.1 Gene:AT1G56130 / 842065 AraportID:AT1G56130 Length:1032 Species:Arabidopsis thaliana


Alignment Length:411 Identity:130/411 - (31%)
Similarity:198/411 - (48%) Gaps:59/411 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 RLIKDYVSE---DLHKY--------IP---RSVPTISELRAAPDSSAKVNNGPPFPSSSGVSNSN 165
            |:.|..|||   ::|.:        ||   ...|.||.:.|.||.:..|.|.||        :..
plant   575 RVYKANVSENHLEVHLFWAGKGTCCIPIQGAYGPLISAVSATPDFTPTVANKPP--------SKG 631

  Fly   166 NNRTSTT--ATEEIPSLESLGNIHISTVQRAA------ESLLEID-------YAELENATDGWSP 215
            .|||.|.  ....:..|..|..:.:.|:::..      |.||.:|       |:||::||..:.|
plant   632 KNRTGTIVGVIVGVGLLSILAGVVMFTIRKRRKRYTDDEELLGMDVKPYIFTYSELKSATQDFDP 696

  Fly   216 DNRLGQGGFGDVYRGKWKQ-LDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYG 279
            .|:||:||||.||:|.... ..||:|:::..|.....:.|.      |:..::|:.|.|::.|||
plant   697 SNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVA------EIVAISSVLHRNLVKLYG 755

  Fly   280 YSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIH 344
            ...:|....|||:.:..|||:..|...|..:    |.|..|:.|.||.|||:.:||......::|
plant   756 CCFEGEHRMLVYEYLPNGSLDQALFGDKTLH----LDWSTRYEICLGVARGLVYLHEEASVRIVH 816

  Fly   345 GDIKPANILLDQCLQPKIGDFGLVR--EGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDV 407
            .|:|.:|||||..|.|:|.||||.:  :..|:..:    .:|.||..||.||:.....|:...||
plant   817 RDVKASNILLDSRLVPQISDFGLAKLYDDKKTHIS----TRVAGTIGYLAPEYAMRGHLTEKTDV 877

  Fly   408 YSFGIVLLEVFTGRQVTDRVPENETKKNLLDYVKQQWRQNR-MELLEKHLAAPMGKELDMCMCAI 471
            |:||:|.||:.:||..:|...|.| ||.||::......::| :||::..|.   ...::.....|
plant   878 YAFGVVALELVSGRPNSDENLEEE-KKYLLEWAWNLHEKSRDIELIDDKLT---DFNMEEAKRMI 938

  Fly   472 EAGLHCTALDPQDRPSMNAVL 492
            ...|.||......||.|:.|:
plant   939 GIALLCTQTSHALRPPMSRVV 959

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021 6/15 (40%)
STKc_IRAK 219..498 CDD:270968 94/278 (34%)
AT1G56130NP_176009.1 PLN00113 113..962 CDD:215061 130/411 (32%)
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..172 CDD:275380
leucine-rich repeat 173..196 CDD:275380
leucine-rich repeat 197..244 CDD:275380
leucine-rich repeat 221..242 CDD:275380
leucine-rich repeat 245..268 CDD:275380
leucine-rich repeat 269..292 CDD:275380
leucine-rich repeat 293..316 CDD:275380
leucine-rich repeat 317..340 CDD:275380
leucine-rich repeat 341..362 CDD:275380
STKc_IRAK 700..962 CDD:270968 94/278 (34%)
Blue background indicates that the domain is not in the aligned region.

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