DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and AT1G52540

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_564609.3 Gene:AT1G52540 / 841685 AraportID:AT1G52540 Length:350 Species:Arabidopsis thaliana


Alignment Length:295 Identity:94/295 - (31%)
Similarity:158/295 - (53%) Gaps:24/295 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 ELENATDGWSPDNRLGQGGFGDVYRGK-WKQLDVAIKVMNYRS--PNIDQKMVELQQSYNELKYL 266
            ||..||:.::.||:||:|.||.||.|: |....:|:|.:...|  ..||..:        |::.|
plant    32 ELHAATNSFNYDNKLGEGRFGSVYWGQLWDGSQIAVKRLKAWSSREEIDFAV--------EVEIL 88

  Fly   267 NSIRHDNILALYGYSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGI 331
            ..|||.|:|::.||..:|.:..:||..|...||.:.|....:...|  |.|.:|.:|::.:|:.|
plant    89 ARIRHKNLLSVRGYCAEGQERLIVYDYMPNLSLVSHLHGQHSSESL--LDWTRRMNIAVSSAQAI 151

  Fly   332 YFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKI-YLPPEF 395
            .:||......::|||::.:|:|||...:.::.|||..:..|.  |...:..|  |..| ||.||.
plant   152 AYLHHFATPRIVHGDVRASNVLLDSEFEARVTDFGYDKLMPD--DGANKSTK--GNNIGYLSPEC 212

  Fly   396 RNFRQLSTGVDVYSFGIVLLEVFTGRQVTDRVPENETKKNLLDYVKQQWRQNRM-ELLEKHLAAP 459
            ....:.|...||||||::|||:.||::.|:|| ...||:.:.::|.....:.:. |::::.|   
plant   213 IESGKESDMGDVYSFGVLLLELVTGKRPTERV-NLTTKRGITEWVLPLVYERKFGEIVDQRL--- 273

  Fly   460 MGKELDMCMCAIE-AGLHCTALDPQDRPSMNAVLK 493
            .||.::..:..|. .||.|...:.:.||:|:.|::
plant   274 NGKYVEEELKRIVLVGLMCAQRESEKRPTMSEVVE 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021
STKc_IRAK 219..498 CDD:270968 88/281 (31%)
TyrKc 219..495 CDD:197581 88/281 (31%)
AT1G52540NP_564609.3 STKc_IRAK 46..311 CDD:270968 88/281 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.