DRSC/TRiP Functional Genomics Resources

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Protein Alignment pll and HERK2

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_174345.1 Gene:HERK2 / 839937 AraportID:AT1G30570 Length:849 Species:Arabidopsis thaliana


Alignment Length:467 Identity:133/467 - (28%)
Similarity:217/467 - (46%) Gaps:72/467 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LYPDQVEQISSQK-----QRGRSASNEFLNIWGGQYNHTVQTLFALFKKLKLHNAMRLIK----- 118
            :|.|.::.:||:.     |.|..:|       .|.....:.:...:||..|..|...||:     
plant   363 IYQDYLDPVSSKNDVLWIQLGPDSS-------VGASGDALLSGLEIFKLSKNGNLAHLIRFDSTG 420

  Fly   119 DYVSEDLHKYIPRSVPT------------------ISELRAAPDSSAKVNNGPP--FPSSSGVSN 163
            ..||:...:.|..||..                  ..:.|:..|.|   .|.||  .|....|:|
plant   421 HSVSDSKMRIIWISVGAGIAIIIFFVFLGILVVCLCKKRRSKSDES---KNNPPGWRPLFLHVNN 482

  Fly   164 SNNNRTSTTATEEIPSLESLGNIHISTVQRAAESL-LEIDYAELENATDGWSPDNRLGQGGFGDV 227
            |..|..:|.           |::.::|:  ||.:: .:...||:..||..:.....:|.||||.|
plant   483 STANAKATG-----------GSLRLNTL--AASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKV 534

  Fly   228 YRGKWKQLDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGGKPCLVYQ 292
            |||:.:  |..:..:...:|:..|.:.|.:   .|:..|:.:||.::::|.|:..:..:..|||:
plant   535 YRGELE--DGTLIAIKRATPHSQQGLAEFE---TEIVMLSRLRHRHLVSLIGFCDEHNEMILVYE 594

  Fly   293 LMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQC 357
            .|..|:    ||:|...:.||.|:|:||....:|:|||:::|||.....:||.|:|..|||||:.
plant   595 YMANGT----LRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDEN 655

  Fly   358 LQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQ 422
            ...|:.||||.:.|| |:|.......|.|:..||.||:...:||:...||||||:||.|....|.
plant   656 FVAKMSDFGLSKAGP-SMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARA 719

  Fly   423 VTD-RVPENETKKNLLDYVKQQWRQNRME-LLEKHLAAPMGKE-LDMCMCAIEAGLHCTALDPQD 484
            |.: .:|:::.  ||.::.....:|..:| :::.:|......| |:...   |....|.|.:.::
plant   720 VINPTLPKDQI--NLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYG---EIAEKCLADEGKN 779

  Fly   485 RPSMNAVLKRFE 496
            ||.|..||...|
plant   780 RPMMGEVLWSLE 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021 16/73 (22%)
STKc_IRAK 219..498 CDD:270968 94/281 (33%)
TyrKc 219..495 CDD:197581 93/278 (33%)
HERK2NP_174345.1 Malectin_like 35..403 CDD:372329 8/46 (17%)
STKc_IRAK 526..791 CDD:270968 93/279 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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