DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and AT1G12460

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_172708.1 Gene:AT1G12460 / 837803 AraportID:AT1G12460 Length:882 Species:Arabidopsis thaliana


Alignment Length:605 Identity:136/605 - (22%)
Similarity:227/605 - (37%) Gaps:171/605 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NQANGNRTRSRSHLDNTMAIRLLPLPVRAQLCAHLDALDVWQQL----ATAVKLYPDQVE----- 70
            |:.||:...|...:::...|||....:...:...:.:|:..|.|    ...:...|:.:.     
plant   318 NKLNGSIPGSIGKMESLSVIRLGNNSIDGVIPRDIGSLEFLQVLNLHNLNLIGEVPEDISNCRVL 382

  Fly    71 ---QISSQKQRGRSASNEFLNIWGGQYNHTVQTLFALFKKLKLHNAMRLIKDYVSEDLHKYIPRS 132
               .:|.....|: .|.:.||:..             .|.|.||.          ..|:..||..
plant   383 LELDVSGNDLEGK-ISKKLLNLTN-------------IKILDLHR----------NRLNGSIPPE 423

  Fly   133 VPTISELRAAPDSSAKVNNGPPFPSSSGVSN-------SNNNRTSTTATEEIPSLESLGN----- 185
            :..:|:::.. |.|....:| |.|||.|..|       |.||.:.  ....:|.:::.|:     
plant   424 LGNLSKVQFL-DLSQNSLSG-PIPSSLGSLNTLTHFNVSYNNLSG--VIPPVPMIQAFGSSAFSN 484

  Fly   186 ---------------------------IHISTV-------------------------QRAAESL 198
                                       :.||.:                         :|..|.:
plant   485 NPFLCGDPLVTPCNSRGAAAKSRNSDALSISVIIVIIAAAVILFGVCIVLALNLRARKRRKDEEI 549

  Fly   199 LEIDYAELENATDG---------------------W--------SPDNRLGQGGFGDVYRGKWK- 233
            |.::...|.::.|.                     |        ..:|.:|.|..|.|||..:: 
plant   550 LTVETTPLASSIDSSGVIIGKLVLFSKNLPSKYEDWEAGTKALLDKENIIGMGSIGSVYRASFEG 614

  Fly   234 QLDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGGKPCLVYQLMKGGS 298
            .:.:|:|.:.......:|:  |.:|   |:..|..::|.|:.:..||........::.:.:..||
plant   615 GVSIAVKKLETLGRIRNQE--EFEQ---EIGRLGGLQHPNLSSFQGYYFSSTMQLILSEFVPNGS 674

  Fly   299 LEARLRAHKAQNPLPA-------LTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQ 356
            |...|  |....|..:       |.|.:||.|:||||:.:.|||......::|.::|..|||||:
plant   675 LYDNL--HLRIFPGTSSSYGNTDLNWHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDE 737

  Fly   357 CLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEF-RNFRQLSTGVDVYSFGIVLLEVFTG 420
            ..:.|:.|:||.:..| .:|:.....|......|:.||. :...:.|...||||:|:||||:.||
plant   738 RYEAKLSDYGLEKFLP-VMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTG 801

  Fly   421 RQVTDRVPENETKKNLLDYVKQQWRQNRMELLE---------KHLAAPMGKELDMCMCAIEAGLH 476
            |:..:...||:. ..|.|||:        :|||         :.|......||...|   :.||.
plant   802 RKPVESPSENQV-LILRDYVR--------DLLETGSASDCFDRRLREFEENELIQVM---KLGLL 854

  Fly   477 CTALDPQDRPSMNAVLKRFE 496
            ||:.:|..||||..|::..|
plant   855 CTSENPLKRPSMAEVVQVLE 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021 17/107 (16%)
STKc_IRAK 219..498 CDD:270968 89/296 (30%)
AT1G12460NP_172708.1 PLN00113 6..875 CDD:215061 136/605 (22%)
leucine-rich repeat 93..116 CDD:275380
leucine-rich repeat 117..140 CDD:275380
leucine-rich repeat 141..165 CDD:275380
leucine-rich repeat 166..189 CDD:275380
leucine-rich repeat 214..237 CDD:275380
leucine-rich repeat 238..261 CDD:275380
leucine-rich repeat 262..285 CDD:275380
leucine-rich repeat 286..309 CDD:275380
leucine-rich repeat 310..333 CDD:275380 4/14 (29%)
leucine-rich repeat 334..357 CDD:275380 4/22 (18%)
leucine-rich repeat 358..381 CDD:275380 3/22 (14%)
leucine-rich repeat 382..405 CDD:275380 5/23 (22%)
leucine-rich repeat 406..429 CDD:275380 7/32 (22%)
leucine-rich repeat 430..453 CDD:275380 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.