DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and HSL2

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_201372.2 Gene:HSL2 / 836700 AraportID:AT5G65710 Length:993 Species:Arabidopsis thaliana


Alignment Length:613 Identity:148/613 - (24%)
Similarity:234/613 - (38%) Gaps:159/613 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NQANGNRTRSRSHLDNTMAIRLLPLPVRAQLCAHLDALDVWQQLATAVKL---------YPDQVE 70
            ||.:|....|.....:...||:....:..::.|..     |:...|.::|         .|..:.
plant   397 NQLSGEIPESYGDCHSLNYIRMADNKLSGEVPARF-----WELPLTRLELANNNQLQGSIPPSIS 456

  Fly    71 QISSQKQRGRSASN------------EFLNIWGGQYNHTVQTLFALFKKLKLHNAMRLIKDYVSE 123
            :.....|...||:|            ..|.:.....|..:.::.:...|||....:.:.::.:..
plant   457 KARHLSQLEISANNFSGVIPVKLCDLRDLRVIDLSRNSFLGSIPSCINKLKNLERVEMQENMLDG 521

  Fly   124 DLHKYIPRSVPTISELRAAPDSSAKVNNG-PP----FPSSSGVSNSNNNRTSTTATE-------- 175
            :    ||.||.:.:||.....|:.::..| ||    .|..:.:..|||..|.....|        
plant   522 E----IPSSVSSCTELTELNLSNNRLRGGIPPELGDLPVLNYLDLSNNQLTGEIPAELLRLKLNQ 582

  Fly   176 ----------EIPS--------LESLGN----------IHISTVQRAAESLLEIDYAELENATDG 212
                      :|||        ...|||          |.....:|....:|.|....:...|..
plant   583 FNVSDNKLYGKIPSGFQQDIFRPSFLGNPNLCAPNLDPIRPCRSKRETRYILPISILCIVALTGA 647

  Fly   213 --W------------------------------------SPDNRLGQGGFGDVYRGKWKQ-LDVA 238
              |                                    :.||.:|.||.|.|||.|.|. ..:|
plant   648 LVWLFIKTKPLFKRKPKRTNKITIFQRVGFTEEDIYPQLTEDNIIGSGGSGLVYRVKLKSGQTLA 712

  Fly   239 IKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALY----GYSIKGGKPCLVYQLMKGGSL 299
            :|.:   .....||........:|::.|..:||.||:.|.    |...:    .|||:.|:.|||
plant   713 VKKL---WGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFR----FLVYEFMENGSL 770

  Fly   300 EARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGD 364
            ...|.:.|....:..|.|..||||::|.|:|:.:||.....|::|.|:|..|||||..::|::.|
plant   771 GDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVAD 835

  Fly   365 FGLVREGP---KSLDAVVEVNK--VFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVT 424
            |||.:  |   :..|.|.:|:.  |.|:..|:.||:....:::...||||||:||||:.||::..
plant   836 FGLAK--PLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPN 898

  Fly   425 D-RVPENETKKNLLDYVK--------------QQWRQNRMEL-----LEKHLAAPMGK----ELD 465
            | ...||:      |.||              :....|:..|     |.| |..|..|    |.:
plant   899 DSSFGENK------DIVKFAMEAALCYPSPSAEDGAMNQDSLGNYRDLSK-LVDPKMKLSTREYE 956

  Fly   466 MCMCAIEAGLHCTALDPQDRPSMNAVLK 493
            .....::..|.||:..|.:||:|..|::
plant   957 EIEKVLDVALLCTSSFPINRPTMRKVVE 984

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021 16/116 (14%)
STKc_IRAK 219..498 CDD:270968 98/309 (32%)
HSL2NP_201372.2 PLN00113 36..987 CDD:215061 148/613 (24%)
leucine-rich repeat 76..99 CDD:275380
leucine-rich repeat 100..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..172 CDD:275380
leucine-rich repeat 173..196 CDD:275380
leucine-rich repeat 197..221 CDD:275380
leucine-rich repeat 222..245 CDD:275380
leucine-rich repeat 246..269 CDD:275380
leucine-rich repeat 270..293 CDD:275380
leucine-rich repeat 294..316 CDD:275380
leucine-rich repeat 389..412 CDD:275380 4/14 (29%)
leucine-rich repeat 413..434 CDD:275380 4/25 (16%)
leucine-rich repeat 436..460 CDD:275380 3/23 (13%)
leucine-rich repeat 461..484 CDD:275380 4/22 (18%)
leucine-rich repeat 485..508 CDD:275380 4/22 (18%)
leucine-rich repeat 509..532 CDD:275380 4/26 (15%)
leucine-rich repeat 533..556 CDD:275380 5/22 (23%)
leucine-rich repeat 557..579 CDD:275380 5/21 (24%)
leucine-rich repeat 580..599 CDD:275380 3/18 (17%)
Blue background indicates that the domain is not in the aligned region.

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