DRSC/TRiP Functional Genomics Resources

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Protein Alignment pll and AT5G56040

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001032080.1 Gene:AT5G56040 / 835702 AraportID:AT5G56040 Length:1090 Species:Arabidopsis thaliana


Alignment Length:500 Identity:125/500 - (25%)
Similarity:204/500 - (40%) Gaps:106/500 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LPVRAQLCAHLDALDV-WQQLATAVKLYPDQVEQISSQKQRGRSASNEFLNIWGGQYNHTV-QTL 101
            :|.|.....:|..||| ..:||..:.:..|....:|             |||...:::..: .||
plant   616 IPSRFSSLTNLGTLDVSHNKLAGNLNVLADLQNLVS-------------LNISFNEFSGELPNTL 667

  Fly   102 FALFKKLKLHNAMRLIKDYVSEDLHKYIPRSVPTISELRAAPDSSAKVNNGPPFPSSSGVSNSNN 166
            |  |:||.|                        ::.|.......|.:..||          ....
plant   668 F--FRKLPL------------------------SVLESNKGLFISTRPENG----------IQTR 696

  Fly   167 NRTSTTATEEIPSLESLGNIHIST-----VQRAAESLLEID------YAELENATD----GWSPD 216
            :|::...|..|....|:..:.::.     .||......|:|      |.:|:.:.|    ..:..
plant   697 HRSAVKVTMSILVAASVVLVLMAVYTLVKAQRITGKQEELDSWEVTLYQKLDFSIDDIVKNLTSA 761

  Fly   217 NRLGQGGFGDVYR-----GKWKQLDVAIKVMNYRSPNIDQKMVELQQSYN-ELKYLNSIRHDNIL 275
            |.:|.|..|.|||     |:    .:|:|.|..:..|         :::| |:..|.||||.||:
plant   762 NVIGTGSSGVVYRVTIPSGE----TLAVKKMWSKEEN---------RAFNSEINTLGSIRHRNII 813

  Fly   276 ALYGYSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGT 340
            .|.|:........|.|..:..|||.:.|  |.|........|:.|:.:.||.|..:.:||.....
plant   814 RLLGWCSNRNLKLLFYDYLPNGSLSSLL--HGAGKGSGGADWEARYDVVLGVAHALAYLHHDCLP 876

  Fly   341 PLIHGDIKPANILLDQCLQPKIGDFGLVR----EGPKSLDAVVEVNK--VFGTKIYLPPEFRNFR 399
            |::|||:|..|:||....:..:.||||.:    ||....|:....|:  :.|:..|:.||..:.:
plant   877 PILHGDVKAMNVLLGSRFESYLADFGLAKIVSGEGVTDGDSSKLSNRPPLAGSYGYMAPEHASMQ 941

  Fly   400 QLSTGVDVYSFGIVLLEVFTGRQVTDRVPENETKKNLLDYVKQQ--WRQNRMELLEKHL---AAP 459
            .::...||||:|:|||||.||:...|  |:.....:|:.:|:..  .:::..|:|:..|   |.|
plant   942 HITEKSDVYSYGVVLLEVLTGKHPLD--PDLPGGAHLVQWVRDHLAGKKDPREILDPRLRGRADP 1004

  Fly   460 MGKELDMCMCAIEAGLHCTALDPQDRPSMN---AVLKRFEPFVTD 501
            :..|:   :..:.....|.:....|||.|.   |:||....|..|
plant  1005 IMHEM---LQTLAVSFLCVSNKASDRPMMKDIVAMLKEIRQFDMD 1046

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021 20/90 (22%)
STKc_IRAK 219..498 CDD:270968 87/298 (29%)
AT5G56040NP_001032080.1 leucine-rich repeat 483..506 CDD:275380
leucine-rich repeat 507..528 CDD:275380
leucine-rich repeat 529..550 CDD:275380
leucine-rich repeat 553..576 CDD:275380
leucine-rich repeat 577..597 CDD:275380
leucine-rich repeat 601..625 CDD:275380 2/8 (25%)
leucine-rich repeat 649..668 CDD:275380 5/31 (16%)
PLN00113 35..1038 CDD:215061 121/490 (25%)
leucine-rich repeat 98..121 CDD:275380
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..169 CDD:275380
leucine-rich repeat 170..193 CDD:275380
leucine-rich repeat 194..242 CDD:275380
leucine-rich repeat 267..290 CDD:275380
leucine-rich repeat 291..314 CDD:275380
leucine-rich repeat 315..338 CDD:275380
leucine-rich repeat 339..362 CDD:275380
leucine-rich repeat 363..386 CDD:275380
leucine-rich repeat 387..410 CDD:275380
leucine-rich repeat 411..434 CDD:275380
leucine-rich repeat 435..458 CDD:275380
leucine-rich repeat 459..482 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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