DRSC/TRiP Functional Genomics Resources

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Protein Alignment pll and PSKR2

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_200200.1 Gene:PSKR2 / 835470 AraportID:AT5G53890 Length:1036 Species:Arabidopsis thaliana


Alignment Length:535 Identity:131/535 - (24%)
Similarity:225/535 - (42%) Gaps:108/535 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NGNRTRSRSHLDNTMAIRLLPLPVRAQLCAHLDALDVWQQLATAVKLYPDQVEQISSQKQRGRSA 82
            |.||      |:.|:      ||...:| ..|..||:.:...|..  .||.:..:.:        
plant   544 NNNR------LNGTI------LPEIGRL-KELHMLDLSRNNFTGT--IPDSISGLDN-------- 585

  Fly    83 SNEFLNIWGGQYNHTVQTLFALFKKLKLHNAMRLIKDYVSEDLHKYIPRSVPTISELRAAPDSSA 147
                |.:....|||...::...|:.|...:...:        .:..:..::|:..:..:.|.||.
plant   586 ----LEVLDLSYNHLYGSIPLSFQSLTFLSRFSV--------AYNRLTGAIPSGGQFYSFPHSSF 638

  Fly   148 KVNNG-------------PPFPSSSGVSNSNNN-----RTSTT---------------------A 173
            :.|.|             ....:..|.|..|||     |:|..                     :
plant   639 EGNLGLCRAIDSPCDVLMSNMLNPKGSSRRNNNGGKFGRSSIVVLTISLAIGITLLLSVILLRIS 703

  Fly   174 TEEIPSLESLGNIHISTVQRAAESL-------------LEIDYAELENATDGWSPDNRLGQGGFG 225
            .:::.  :.:.::...|:...:::|             .::...||..:|:.:|..|.:|.||||
plant   704 RKDVD--DRINDVDEETISGVSKALGPSKIVLFHSCGCKDLSVEELLKSTNNFSQANIIGCGGFG 766

  Fly   226 DVYRGKWKQ-LDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGGKPCL 289
            .||:..:.. ...|:|.:   |.:..|...|.|.   |::.|:...|.|:::|.||...|....|
plant   767 LVYKANFPDGSKAAVKRL---SGDCGQMEREFQA---EVEALSRAEHKNLVSLQGYCKHGNDRLL 825

  Fly   290 VYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILL 354
            :|..|:.|||:..|  |:..:....|.|..|..|:.|.|||:.:||......:||.|:|.:||||
plant   826 IYSFMENGSLDYWL--HERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILL 888

  Fly   355 DQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLLEVFT 419
            |:..:..:.||||.|. .:..|..|..:.| ||..|:|||:......:...||||||:||||:.|
plant   889 DEKFEAHLADFGLARL-LRPYDTHVTTDLV-GTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVT 951

  Fly   420 GRQVTDRVPENETKKNLLDYVKQQWRQNR-MELLEKHLAAPMGKE--LDMCMCAIEAGLHCTALD 481
            ||:..: |.:.::.::|:..|.|...:.| .||::..:...:.:.  |:|    :|....|...:
plant   952 GRRPVE-VCKGKSCRDLVSRVFQMKAEKREAELIDTTIRENVNERTVLEM----LEIACKCIDHE 1011

  Fly   482 PQDRPSMNAVLKRFE 496
            |:.||.:..|:...|
plant  1012 PRRRPLIEEVVTWLE 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021 15/95 (16%)
STKc_IRAK 219..498 CDD:270968 91/282 (32%)
PSKR2NP_200200.1 PLN00113 1..1026 CDD:215061 130/533 (24%)
leucine-rich repeat 90..113 CDD:275380
leucine-rich repeat 114..160 CDD:275380
leucine-rich repeat 161..185 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..257 CDD:275380
leucine-rich repeat 258..281 CDD:275380
leucine-rich repeat 282..305 CDD:275380
leucine-rich repeat 306..329 CDD:275380
leucine-rich repeat 330..351 CDD:275380
leucine-rich repeat 354..403 CDD:275380
leucine-rich repeat 404..427 CDD:275380
leucine-rich repeat 428..449 CDD:275380
leucine-rich repeat 452..475 CDD:275380
leucine-rich repeat 476..499 CDD:275380
leucine-rich repeat 500..561 CDD:275380 8/29 (28%)
leucine-rich repeat 562..585 CDD:275380 6/24 (25%)
leucine-rich repeat 586..607 CDD:275380 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

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