DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and AT5G39000

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_198716.1 Gene:AT5G39000 / 833892 AraportID:AT5G39000 Length:873 Species:Arabidopsis thaliana


Alignment Length:429 Identity:125/429 - (29%)
Similarity:194/429 - (45%) Gaps:71/429 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 DLH-------KYIPRSVPTISELRA-APDSSAKVNNGPPFPSSSGVSNSNNNRTSTTATEEIP-S 179
            |||       ||....:..:..|:. .||.:....|..|..|...:.|....|.....:..:| :
plant   381 DLHPLVSINPKYYDAILNGVEILKMNDPDGNLAGPNPDPLVSPDLIPNRATPRIRKNKSHILPIT 445

  Fly   180 LESLGNIHI----------------------------------STVQRAAESL-----LEIDYAE 205
            |..:|::.:                                  ||..:.|:||     ......|
plant   446 LAVVGSLVVLAMFVVGVLVIMKKKKKSKPSTNSSWCPLPHGTDSTNTKPAKSLPADLCRRFSIFE 510

  Fly   206 LENATDGWSPDNRLGQGGFGDVYRGKWKQLD-----VAIKVMNYRSPNIDQKMVELQQSYNELKY 265
            :::||:.:.....:|.||||.||:|   |:|     ||:|.:...|   :|...|.:   .||:.
plant   511 IKSATNDFEDKLIIGVGGFGSVYKG---QIDGGATLVAVKRLEITS---NQGAKEFE---TELEM 566

  Fly   266 LNSIRHDNILALYGYSIKGGKPCLVYQLMKGGSLEARL-RAHKAQNPLPALTWQQRFSISLGTAR 329
            |:.:||.::::|.||..:..:..|||:.|..|:|:..| |..|..:  |.|:|::|..|.:|.||
plant   567 LSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSD--PPLSWKRRLEICIGAAR 629

  Fly   330 GIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPE 394
            |:.:|||.....:||.|||..|||||:....|:.||||.|.||.|.........|.||..||.||
plant   630 GLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPE 694

  Fly   395 FRNFRQLSTGVDVYSFGIVLLEVFTGRQV-TDRVPENETKKNLLDYVKQQWRQNRM-ELLEKHLA 457
            :...:.|:...||||||:|||||...|.: ...||..:.  :|:.:||..:|:..: ::::..|:
plant   695 YYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQA--DLIRWVKSNYRRGTVDQIIDSDLS 757

  Fly   458 APMGKELDMCMCAIEAGLHCTALDPQDRPSMNAVLKRFE 496
            |.:........|  |..:.|......:||.||.|:...|
plant   758 ADITSTSLEKFC--EIAVRCVQDRGMERPPMNDVVWALE 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021 3/10 (30%)
STKc_IRAK 219..498 CDD:270968 101/286 (35%)
TyrKc 219..495 CDD:197581 100/283 (35%)
AT5G39000NP_198716.1 Malectin_like 35..405 CDD:372329 6/23 (26%)
STKc_IRAK 524..794 CDD:270968 100/284 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.