DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment pll and AT5G24100

DIOPT Version :9

Sequence 1:	NP_001263008.1	Gene:	pll / 43283	FlyBaseID:	FBgn0010441	Length:	501	Species:	Drosophila melanogaster
Sequence 2:	NP_197798.1	Gene:	AT5G24100 / 832475	AraportID:	AT5G24100	Length:	614	Species:	Arabidopsis thaliana

Alignment Length:	447	Identity:	104/447 - (23%)
Similarity:	174/447 - (38%)	Gaps:	74/447 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    66 PDQVEQISSQKQRGRSASN-EFLNIWGGQYNHTVQTLFALFKKLKLHNAMRLIKDYVSEDLHKYI 129
            |..|.....||:.|...|. ..|.|       .:...|.:|..:    |:.:|..||.....
plant   231 PPAVVSFKEQKKNGIYISEPAILGI-------AISVCFVIFFVI----AVVIIVCYVKRQRK--- 281

  Fly   130 PRSVPTISELRAAPDSSAKVNNGPPFPSSSGVSNSNNNRTSTTATEEIPSLESLGNIHISTVQRA 194
                   ||....||   |:......||...||.....:.    .|::.....:..:........
plant   282 -------SETEPKPD---KLKLAKKMPSEKEVSKLGKEKN----IEDMEDKSEINKVMFFEGSNL 332

  Fly   195 AESLLEIDYAELENATDGWSPDNRLGQGGFGDVYRGKWKQLDV-AIKVMNYRSPNIDQKMVELQQ 258
            |.:|.::..|..|          .||:|.||..|:...:...| |:|       .:...:|..:.
plant   333 AFNLEDLLIASAE----------FLGKGVFGMTYKAVLEDSKVIAVK-------RLKDIVVSRKD 380

  Fly   259 SYNELKYLNSIRHDNILALYGYSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSI 323
            ..::::.:.:|:|:|:..|..|.....:..:||.....|||..||....|......|.|:.|...
plant   381 FKHQMEIVGNIKHENVAPLRAYVCSKEEKLMVYDYDSNGSLSLRLHGKNADEGHVPLNWETRLRF 445

  Fly   324 SLGTARGIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREG--PKSLDAVVEVNKVFG 386
            .:|.|:|:..:||..   |.||:||.:|:.::.      ..:|.:.|.  |...:.||..:....
plant   446 MIGVAKGLGHIHTQN---LAHGNIKSSNVFMNS------EGYGCISEAGLPLLTNPVVRADSSAR 501

  Fly   387 TKI-YLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVTDRVPENETKKNL------LDYVKQQW 444
            :.: |..||..:.|:.:...|:|||||::||..|||.:.|     :.|:.:      .|.:.:||
plant   502 SVLRYRAPEVTDTRRSTPESDIYSFGILMLETLTGRSIMD-----DRKEGIDLVVWVNDVISKQW 561

  Fly   445 RQNRMELLEKHLAAPMGKELDMCMCAIEAGLHCTALDPQDRPSMNAVLKRFEPFVTD 501
            ..   |:.:..|......|..: :..::.|..|||:.|..||.|..|::..|....|
plant   562 TG---EVFDLELVKTPNVEAKL-LQMLQLGTSCTAMVPAKRPDMVKVVETLEEIERD 614

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
pll	NP_001263008.1	Death_Pelle	32..128	CDD:260021	14/62 (23%)
		STKc_IRAK	219..498	CDD:270968	75/288 (26%)
		TyrKc	219..495	CDD:197581	74/285 (26%)
AT5G24100	NP_197798.1	LRRNT_2	30..68	CDD:369783
		PLN00113	<70..613	CDD:215061	103/444 (23%)
		leucine-rich repeat	99..122	CDD:275380
		leucine-rich repeat	123..146	CDD:275380
		leucine-rich repeat	147..170	CDD:275380
		leucine-rich repeat	171..192	CDD:275380
		PKc_like	347..611	CDD:389743	75/288 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	3	2.960