DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and EFR

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_197548.1 Gene:EFR / 832170 AraportID:AT5G20480 Length:1031 Species:Arabidopsis thaliana


Alignment Length:591 Identity:141/591 - (23%)
Similarity:228/591 - (38%) Gaps:169/591 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GNRTR-SRSHLD-NTMAIRLLPLPVRAQLCAHLDALDVW-----------QQLATAVKL------ 64
            ||.|| .:.||: |:...|   :|.....|.:|  ||:|           |::.....|      
plant   438 GNMTRLQKLHLNSNSFHGR---IPQSLGRCRYL--LDLWMDTNRLNGTIPQEILQIPSLAYIDLS 497

  Fly    65 -------YPDQVEQI--------SSQKQRGR-------SASNEFLNIWGGQYNHTVQTLFALFKK 107
                   :|::|.::        |..|..|:       ..|.|||.:.|..::..:..:..|   
plant   498 NNFLTGHFPEEVGKLELLVGLGASYNKLSGKMPQAIGGCLSMEFLFMQGNSFDGAIPDISRL--- 559

  Fly   108 LKLHNAMRLIKDYVSEDLHKYIPRSVPTISELRAAPDSSAKVNNGPP----FPSSSGVS---NSN 165
            :.|.|.     |:.:.:|...|||.:.::..||....|..|.....|    |.:::.||   |:|
plant   560 VSLKNV-----DFSNNNLSGRIPRYLASLPSLRNLNLSMNKFEGRVPTTGVFRNATAVSVFGNTN 619

  Fly   166 -------------------------------------------------------NNRTSTTATE 175
                                                                   ..:....|::
plant   620 ICGGVREMQLKPCIVQASPRKRKPLSVRKKVVSGICIGIASLLLIIIVASLCWFMKRKKKNNASD 684

  Fly   176 EIPS-LESLGNIHISTVQRAAESLLEIDYAELENATDGWSPDNRLGQGGFGDVYRGKW--KQLDV 237
            ..|| ..:||..|           .::.|.||.:||..:|..|.:|.|.||:|::|..  :...|
plant   685 GNPSDSTTLGMFH-----------EKVSYEELHSATSRFSSTNLIGSGNFGNVFKGLLGPENKLV 738

  Fly   238 AIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALY---------GYSIKGGKPCLVYQL 293
            |:||:|.......:..:.      |.:....|||.|::.|.         |...:    .|||:.
plant   739 AVKVLNLLKHGATKSFMA------ECETFKGIRHRNLVKLITVCSSLDSEGNDFR----ALVYEF 793

  Fly   294 MKGGSLEARLR---AHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLD 355
            |..|||:..|:   ..:..:...:||..::.:|::..|..:.:||.....|:.|.||||:|||||
plant   794 MPKGSLDMWLQLEDLERVNDHSRSLTPAEKLNIAIDVASALEYLHVHCHDPVAHCDIKPSNILLD 858

  Fly   356 QCLQPKIGDFGLVREGPKSLDAVVEVNK-----VFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLL 415
            ..|...:.||||.:...| .|....:|:     |.||..|..||:....|.|...|||||||:||
plant   859 DDLTAHVSDFGLAQLLYK-YDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGILLL 922

  Fly   416 EVFTGRQVTDRVPENETKKNLLDYVKQQWRQNRMELLEKHLAAPMGKELDMCM-CAIEAGLHCTA 479
            |:|:|::.||.....:  .||..|.|        .:|....::.....:|..: ..::.|:.|:.
plant   923 EMFSGKKPTDESFAGD--YNLHSYTK--------SILSGCTSSGGSNAIDEGLRLVLQVGIKCSE 977

  Fly   480 LDPQDR 485
            ..|:||
plant   978 EYPRDR 983

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021 24/134 (18%)
STKc_IRAK 219..498 CDD:270968 84/287 (29%)
EFRNP_197548.1 PLN00113 20..1006 CDD:215061 141/591 (24%)
leucine-rich repeat 77..98 CDD:275380
leucine-rich repeat 99..122 CDD:275380
leucine-rich repeat 123..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..242 CDD:275380
leucine-rich repeat 243..291 CDD:275380
leucine-rich repeat 292..345 CDD:275380
leucine-rich repeat 346..370 CDD:275380
leucine-rich repeat 371..394 CDD:275380
leucine-rich repeat 395..418 CDD:275380
leucine-rich repeat 419..442 CDD:275380 2/3 (67%)
leucine-rich repeat 443..466 CDD:275380 6/25 (24%)
leucine-rich repeat 467..490 CDD:275380 5/24 (21%)
leucine-rich repeat 491..514 CDD:275380 3/22 (14%)
leucine-rich repeat 515..561 CDD:275380 9/48 (19%)
leucine-rich repeat 562..585 CDD:275380 7/27 (26%)
leucine-rich repeat 586..608 CDD:275380 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

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