DRSC/TRiP Functional Genomics Resources

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Protein Alignment pll and AT5G06940

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_196311.1 Gene:AT5G06940 / 830585 AraportID:AT5G06940 Length:872 Species:Arabidopsis thaliana


Alignment Length:268 Identity:83/268 - (30%)
Similarity:132/268 - (49%) Gaps:35/268 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 KVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGGKPCLVYQLMKGGSLEARLR 304
            |::|  |.||..|.::.|     ::.:..|||.||..:.|:..|.....|:|:..:.|||...| 
plant   618 KLVN--SKNISSKSLKAQ-----VRTIAKIRHKNITRILGFCFKDEMIFLIYEFTQNGSLHDML- 674

  Fly   305 AHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVR 369
             .:|.:.||   |..|..|:||.|:.:.::.......|:|.::|.|||.||:..:||:.||.|..
plant   675 -SRAGDQLP---WSIRLKIALGVAQALAYISKDYVPHLLHRNLKSANIFLDKDFEPKLSDFALDH 735

  Fly   370 -EGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVTDRVPENETK 433
             .|..:..::|..|.   ...|..||....::.:..:||||||:||||:.|| |..::..|..:.
plant   736 IVGETAFQSLVHANT---NSCYTAPENHYSKKATEDMDVYSFGVVLLELVTG-QSAEKAEEGSSG 796

  Fly   434 KNLLDYVKQQWRQNRM----------ELLEKHLAAPMGKELDMCMCAIEAGLHCTALDPQDRPSM 488
            :: ||.|||..|:..:          ::|.....:.|.|.||:       .|.|||:..:.|||:
plant   797 ES-LDIVKQVRRKINLTDGAAQVLDQKILSDSCQSDMRKTLDI-------ALDCTAVAAEKRPSL 853

  Fly   489 NAVLKRFE 496
            ..|:|..|
plant   854 VKVIKLLE 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021
STKc_IRAK 219..498 CDD:270968 83/268 (31%)
AT5G06940NP_196311.1 PLN00113 31..868 CDD:215061 83/268 (31%)
leucine-rich repeat 101..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..172 CDD:275380
leucine-rich repeat 173..196 CDD:275380
leucine-rich repeat 197..221 CDD:275380
leucine-rich repeat 222..245 CDD:275380
leucine-rich repeat 246..270 CDD:275380
leucine-rich repeat 271..294 CDD:275380
leucine-rich repeat 295..318 CDD:275380
leucine-rich repeat 319..342 CDD:275380
leucine-rich repeat 367..390 CDD:275380
leucine-rich repeat 391..411 CDD:275380
leucine-rich repeat 415..437 CDD:275380
leucine-rich repeat 438..461 CDD:275380
leucine-rich repeat 462..483 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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