DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and AT4G02410

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_567233.1 Gene:AT4G02410 / 828032 AraportID:AT4G02410 Length:674 Species:Arabidopsis thaliana


Alignment Length:535 Identity:139/535 - (25%)
Similarity:238/535 - (44%) Gaps:103/535 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NGNRTRSRSHL-----------------DNTMAIRLLPL-PVRAQLCAHLDALDVWQQLATAVKL 64
            |||.|   :|:                 ||.:.|.:..| .|::.|..:.|.::.:..|.     
plant   134 NGNDT---NHILAVEFDTIMNPEFDDTNDNHVGININSLTSVKSSLVGYWDEINQFNNLT----- 190

  Fly    65 YPDQVEQISSQKQRGRSASNEFLNIWGGQYNHT--VQTLFALFKKLKLHNAM-RLIKDYVS---E 123
                   :.|:|:         :.:|....:.|  :....|.|.::|...|: .:::|..|   :
plant   191 -------LISRKR---------MQVWVDYDDRTNQIDVTMAPFGEVKPRKALVSVVRDLSSVFLQ 239

  Fly   124 DLHKYIPRSVPT---ISE------------LRAAPDSSAKVNNGPPFP--SSSGVSNSNNNRTST 171
            |:  |:..|..|   :||            ..|.|.:.:||   |.||  ..:.:.....||...
plant   240 DM--YLGFSAATGYVLSEHFVFGWSFMVKGKTAPPLTLSKV---PKFPRVGPTSLQRFYKNRMPL 299

  Fly   172 TATEEIP-----SLESLGNIHISTVQRAAESLLE---------IDYAELENATDGWSPDNRLGQG 222
            .:...||     ||..|....:...::.||...:         :.:.:|..||.|:...:.||.|
plant   300 FSLLLIPVLFVVSLIFLVRFIVRRRRKFAEEFEDWETEFGKNRLRFKDLYYATKGFKDKDLLGSG 364

  Fly   223 GFGDVYRG--KWKQLDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGG 285
            |||.||||  ...:.::|:|.::      ::....|::...|:..:..:.|.|::.|.||..:..
plant   365 GFGRVYRGVMPTTKKEIAVKRVS------NESRQGLKEFVAEIVSIGRMSHRNLVPLLGYCRRRD 423

  Fly   286 KPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPA 350
            :..|||..|..|||:..|    ...|...|.|:|||::.:|.|.|:::||......:||.|||.:
plant   424 ELLLVYDYMPNGSLDKYL----YDCPEVTLDWKQRFNVIIGVASGLFYLHEEWEQVVIHRDIKAS 484

  Fly   351 NILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLL 415
            |:|||.....::|||||.|......|.  :..:|.||..||.|:.....:.:|..||::||::||
plant   485 NVLLDAEYNGRLGDFGLARLCDHGSDP--QTTRVVGTWGYLAPDHVRTGRATTATDVFAFGVLLL 547

  Fly   416 EVFTGRQVTDRVPENETKKNLLDYVKQQWRQ-NRMELLEKHLAAPMG-KELDMCMCAIEAGLHCT 478
            ||..||:..:...|::....|:|.|...|.: |.::..:.:|.:... :|::   ..::.||.|:
plant   548 EVACGRRPIEIEIESDESVLLVDSVFGFWIEGNILDATDPNLGSVYDQREVE---TVLKLGLLCS 609

  Fly   479 ALDPQDRPSMNAVLK 493
            ..|||.||:|..||:
plant   610 HSDPQVRPTMRQVLQ 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021 17/102 (17%)
STKc_IRAK 219..498 CDD:270968 90/279 (32%)
TyrKc 219..495 CDD:197581 90/279 (32%)
AT4G02410NP_567233.1 Lectin_legB 26..279 CDD:278564 33/173 (19%)
STYKc 358..626 CDD:214568 90/282 (32%)
STKc_IRAK 361..626 CDD:270968 90/279 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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