DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and GSO1

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_193747.2 Gene:GSO1 / 827760 AraportID:AT4G20140 Length:1249 Species:Arabidopsis thaliana


Alignment Length:636 Identity:148/636 - (23%)
Similarity:248/636 - (38%) Gaps:178/636 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QNQANG------NRTRSRSHLDNTMAIRLLPLPVRAQLCAHLDALDV-----------W----QQ 57
            :||..|      .:.|..|.||.:.......:|::..||..|..:|:           |    .|
plant   608 KNQLTGKIPWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDLNNNFLSGPIPPWLGKLSQ 672

  Fly    58 LATAVKLYPDQ-VEQISSQ----------------------KQRGRSASNEFLNIWGGQYNHTVQ 99
            |. .:||..:| ||.:.::                      ::.|...:...||:...|::.::.
plant   673 LG-ELKLSSNQFVESLPTELFNCTKLLVLSLDGNSLNGSIPQEIGNLGALNVLNLDKNQFSGSLP 736

  Fly   100 TLFALFKKLKLHNAMRLIKDYVS----------EDLHKY-----------IPRSVPTISELRAAP 143
            .  |:.|..||:. :||.::.::          :||...           ||.::.|:|:|....
plant   737 Q--AMGKLSKLYE-LRLSRNSLTGEIPVEIGQLQDLQSALDLSYNNFTGDIPSTIGTLSKLETLD 798

  Fly   144 DSSAKVNNGPP-----------------------------FPSSSGVSN---------------S 164
            .|..::....|                             :|:.|.:.|               |
plant   799 LSHNQLTGEVPGSVGDMKSLGYLNVSFNNLGGKLKKQFSRWPADSFLGNTGLCGSPLSRCNRVRS 863

  Fly   165 NNNRTSTTA-----TEEIPSLESLGNI-------------------HISTVQ------------- 192
            ||.:...:|     ...|.:|.::|.:                   |.||..             
plant   864 NNKQQGLSARSVVIISAISALTAIGLMILVIALFFKQRHDFFKKVGHGSTAYTSSSSSSQATHKP 928

  Fly   193 --RAAESLLEIDYAELENATDGWSPDNRLGQGGFGDVYRGKWKQLD-VAIKVMNYRSPNIDQKMV 254
              |...|..:|.:.::..||...|.:..:|.||.|.||:.:.:..: ||:|.:.::...:..|..
plant   929 LFRNGASKSDIRWEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSF 993

  Fly   255 ELQQSYNELKYLNSIRHDNILALYGY--SIKGGKPCLVYQLMKGGSLEARLRAHK--AQNPLPAL 315
            .     .|:|.|..|||.:::.|.||  |...|...|:|:.||.||:...|...|  .:.....|
plant   994 S-----REVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLL 1053

  Fly   316 TWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREGPKSLDAVVE 380
            .|:.|..|::|.|:|:.:||.....|::|.|||.:|:|||..::..:|||||.:...::.|...:
plant  1054 DWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTD 1118

  Fly   381 VNKVFGTKI-YLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVTDRVPENETKKNLLDYVKQQW 444
            .|..|.... |:.||:....:.:...||||.||||:|:.||:..||.|...|     :|.|:  |
plant  1119 SNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAE-----MDMVR--W 1176

  Fly   445 RQNRME--------LLEKHLAAPMGKELDMCMCAIEAGLHCTALDPQDRPS 487
            .:..:|        |::..|...:..|.|.....:|..|.||...||:|||
plant  1177 VETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQERPS 1227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021 25/143 (17%)
STKc_IRAK 219..498 CDD:270968 90/283 (32%)
GSO1NP_193747.2 PLN00113 25..1235 CDD:215061 148/636 (23%)
leucine-rich repeat 73..96 CDD:275380
leucine-rich repeat 97..120 CDD:275380
leucine-rich repeat 121..144 CDD:275380
leucine-rich repeat 145..168 CDD:275380
leucine-rich repeat 169..192 CDD:275380
leucine-rich repeat 193..240 CDD:275380
leucine-rich repeat 217..237 CDD:275380
leucine-rich repeat 241..264 CDD:275380
leucine-rich repeat 265..288 CDD:275380
leucine-rich repeat 289..312 CDD:275380
leucine-rich repeat 313..337 CDD:275380
PLN03150 <316..404 CDD:178695
leucine-rich repeat 338..361 CDD:275380
leucine-rich repeat 362..385 CDD:275380
leucine-rich repeat 386..409 CDD:275380
leucine-rich repeat 410..433 CDD:275380
leucine-rich repeat 434..457 CDD:275380
leucine-rich repeat 458..481 CDD:275380
leucine-rich repeat 482..505 CDD:275380
leucine-rich repeat 506..527 CDD:275380
leucine-rich repeat 530..553 CDD:275380
PLN03150 <533..620 CDD:178695 3/11 (27%)
leucine-rich repeat 601..624 CDD:275380 3/15 (20%)
leucine-rich repeat 625..648 CDD:275380 6/22 (27%)
PLN03150 <628..716 CDD:178695 15/88 (17%)
leucine-rich repeat 649..672 CDD:275380 3/22 (14%)
leucine-rich repeat 673..696 CDD:275380 6/23 (26%)
leucine-rich repeat 697..720 CDD:275380 1/22 (5%)
leucine-rich repeat 721..744 CDD:275380 5/24 (21%)
leucine-rich repeat 745..768 CDD:275380 3/23 (13%)
leucine-rich repeat 769..793 CDD:275380 4/23 (17%)
leucine-rich repeat 818..838 CDD:275380 0/19 (0%)
Blue background indicates that the domain is not in the aligned region.

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