DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and AT4G04960

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_567277.1 Gene:AT4G04960 / 825837 AraportID:AT4G04960 Length:686 Species:Arabidopsis thaliana


Alignment Length:503 Identity:134/503 - (26%)
Similarity:224/503 - (44%) Gaps:112/503 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 ASNEFLNIWGGQYNHTVQTLFA--------------LFKKLKLHNAMRL-----IKDYVSEDLHK 127
            |:.||.:|........|.:|.:              :||.|||::....     .:|:|.....:
plant   143 ANQEFSDIDANHVGIDVNSLHSVYSNTSGYWSDDGVVFKPLKLNDGRNYQVWIDYRDFVVNVTMQ 207

  Fly   128 YIPRSVPTISELRAAPDSSAKVNN----GPPFPSSSG------------VSNSNNNRTSTTATEE 176
            ...:..|.|..|..:.:.|..|.:    |  |.:::|            .||||.:.:::..|..
plant   208 VAGKIRPKIPLLSTSLNLSDVVEDEMFVG--FTAATGRLVQSHKILAWSFSNSNFSLSNSLITTG 270

  Fly   177 IPS-------------------------LESLGNIHISTVQRAAE-----SLLE----------I 201
            :||                         :..:|.:..:.|::..|     :|:|          |
plant   271 LPSFVLPKDSIVKAKWFVFVLVLICFLVVALVGLVLFAVVRKRLERARKRALMEDWEMEYWPHRI 335

  Fly   202 DYAELENATDGWSPDNRLGQGGFGDVYRG--KWKQLDVAIKVMNYRSPNIDQKMVELQQSYNELK 264
            .|.|:|:.|.|:...|.:|.||.|.||:|  :...::||:|.::..|.:      .:::...|:.
plant   336 PYEEIESGTKGFDEKNVIGIGGNGKVYKGLLQGGVVEVAVKRISQESSD------GMREFVAEIS 394

  Fly   265 YLNSIRHDNILALYGYSIKG-GKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTA 328
            .|..::|.|:::|.|:..|. |...|||..|:.|||:..:  .:....:..|:.::|..|..|.|
plant   395 SLGRLKHRNLVSLRGWCKKEVGSFMLVYDYMENGSLDRWI--FENDEKITTLSCEERIRILKGVA 457

  Fly   329 RGIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVR----EGPKSLDAVVEVNKVFGTKI 389
            .||.:||....:.::|.|||.:|:|||:.:.|::.||||.|    |.|      |...:|.||..
plant   458 SGILYLHEGWESKVLHRDIKASNVLLDRDMIPRLSDFGLARVHGHEQP------VRTTRVVGTAG 516

  Fly   390 YLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVTDRVPENETKKNLLDYVKQQW-RQNRMELL- 452
            ||.||.....:.||..||:::||::|||..||:     |..|.||.|:|:|   | ...|.|:| 
plant   517 YLAPEVVKTGRASTQTDVFAYGILVLEVMCGRR-----PIEEGKKPLMDWV---WGLMERGEILN 573

  Fly   453 ----EKHLAAPMGKELDMCMCAIEAGLHCTALDPQDRPSMNAVLKRFE 496
                :..:...:.:.:|.....::.||.|...||..||||..|::.||
plant   574 GLDPQMMMTQGVTEVIDEAERVLQLGLLCAHPDPAKRPSMRQVVQVFE 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021 13/64 (20%)
STKc_IRAK 219..498 CDD:270968 94/291 (32%)
TyrKc 219..495 CDD:197581 92/288 (32%)
AT4G04960NP_567277.1 lectin_legume_LecRK_Arcelin_ConA 21..253 CDD:173887 21/111 (19%)
Pkinase 347..618 CDD:278497 93/292 (32%)
STKc_IRAK 353..622 CDD:270968 94/291 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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