DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and AT3G53840

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_190952.2 Gene:AT3G53840 / 824551 AraportID:AT3G53840 Length:639 Species:Arabidopsis thaliana


Alignment Length:336 Identity:107/336 - (31%)
Similarity:168/336 - (50%) Gaps:41/336 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 GNIHISTVQRAAESLLEIDYA---------ELENATDGWSPDNRLGQGGFGDVYRGKWKQLDVAI 239
            ||...::|::...:||.|:..         |:..|||.::..|.||.||||:|::|   .||...
plant   316 GNQSWASVRKLHRNLLSINSTGLDRIFTGKEIVKATDNFAKSNLLGFGGFGEVFKG---NLDDGT 377

  Fly   240 KVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGGKPCLVYQLMKGGSL----- 299
            .|...|:...::|  .:.|..||::.|..:.|.|::.|.|..|:...|.|||:.:..|:|     
plant   378 TVAVKRAKLGNEK--SIYQIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIY 440

  Fly   300 -----EARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQCLQ 359
                 ...|..|        |..::|..|:..||:|:.:||::...|:.|.|:|.:|||||:.|.
plant   441 GGGGGGGGLYDH--------LPLRRRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSSNILLDENLD 497

  Fly   360 PKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPE-FRNFRQLSTGVDVYSFGIVLLEVFTGRQV 423
            .|:.||||.|.|...:..|....:  ||..||.|| :.|| ||:...||||||:||.|:.|.::.
plant   498 VKVADFGLSRLGVSDVSHVTTCAQ--GTLGYLDPEYYLNF-QLTDKSDVYSFGVVLFELLTCKKA 559

  Fly   424 TDRVPENETKKNLLDYVKQQWRQNR-MELLEKHLA-APMGKELD-MCMCAIEAGLHCTALDPQDR 485
            .|...|.| ..||:.:|::..::.| |::::..:. ....||:: |....:.|.| |.....|.|
plant   560 IDFNREEE-DVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAEL-CVKETRQCR 622

  Fly   486 PSMNAVLKRFE 496
            |:|....|..|
plant   623 PTMQVAAKEIE 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021
STKc_IRAK 219..498 CDD:270968 96/292 (33%)
TyrKc 219..495 CDD:197581 95/289 (33%)
AT3G53840NP_190952.2 GUB_WAK_bind 28..127 CDD:372835
PKc_like 360..635 CDD:389743 96/292 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.