DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and PERK1

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_189098.1 Gene:PERK1 / 822051 AraportID:AT3G24550 Length:652 Species:Arabidopsis thaliana


Alignment Length:418 Identity:126/418 - (30%)
Similarity:191/418 - (45%) Gaps:66/418 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 WGGQYNHTVQTLFALFKKLKLHNAMRLIKDYVSEDLHKYIPRSVPTISELRAAPDSSAKVNNGPP 154
            :|||..:..|           .||.|...::|...|....|.|.|     |..|         ||
plant   192 YGGQQQYWQQ-----------QNASRPSDNHVVTSLPPPKPPSPP-----RKPP---------PP 231

  Fly   155 FPSSSGVSNSNNNRTSTTATEEIPSLESLGNIHISTVQRAAESLLEIDYAELENATDGWSPDNRL 219
            .|..:.:|:|..:..|.......||...:.....||          ..|.||..||:|:|..|.|
plant   232 PPPPAFMSSSGGSDYSDLPVLPPPSPGLVLGFSKST----------FTYEELSRATNGFSEANLL 286

  Fly   220 GQGGFGDVYRGKWKQ-LDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIK 283
            ||||||.|::|.... .:||:|.:...|   .|...|.|.   |::.::.:.|.::::|.||.:.
plant   287 GQGGFGYVHKGILPSGKEVAVKQLKAGS---GQGEREFQA---EVEIISRVHHRHLVSLIGYCMA 345

  Fly   284 GGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIK 348
            |.:..|||:.:...:||..|.. |.:   |.:.|..|..|:||:|:|:.:||......:||.|||
plant   346 GVQRLLVYEFVPNNNLEFHLHG-KGR---PTMEWSTRLKIALGSAKGLSYLHEDCNPKIIHRDIK 406

  Fly   349 PANILLDQCLQPKIGDFGLVREGPKSLDAVVEVN-KVFGTKIYLPPEFRNFRQLSTGVDVYSFGI 412
            .:|||:|...:.|:.||||.:   .:.|....|: :|.||..||.||:....:|:...||:|||:
plant   407 ASNILIDFKFEAKVADFGLAK---IASDTNTHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGV 468

  Fly   413 VLLEVFTGRQVTDRVPENE--TKKNLLDYVKQQWRQNRMELLEKHLA-APMGKELD------MCM 468
            ||||:.|||:..|   .|.  ...:|:|:.:....:...|...:.|| :.||.|.|      |..
plant   469 VLLELITGRRPVD---ANNVYVDDSLVDWARPLLNRASEEGDFEGLADSKMGNEYDREEMARMVA 530

  Fly   469 CAIEAGLHCTALDPQDRPSMNAVLKRFE 496
            ||..    |.....:.||.|:.:::..|
plant   531 CAAA----CVRHSARRRPRMSQIVRALE 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021 9/37 (24%)
STKc_IRAK 219..498 CDD:270968 94/289 (33%)
TyrKc 219..495 CDD:197581 93/286 (33%)
PERK1NP_189098.1 PKc_like 286..555 CDD:304357 94/289 (33%)
STYKc 286..553 CDD:214568 93/286 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.870

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