DRSC/TRiP Functional Genomics Resources

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Protein Alignment pll and AT3G24240

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_189066.1 Gene:AT3G24240 / 822011 AraportID:AT3G24240 Length:1141 Species:Arabidopsis thaliana


Alignment Length:609 Identity:147/609 - (24%)
Similarity:220/609 - (36%) Gaps:202/609 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LDNTMAIRLLPLPVRAQLCAHLDALDVWQQLATAVKLYPDQVEQISSQ--KQRGRSASNEFLNIW 90
            |.|......||.||.:  .:.|..|||             ...|.|.:  ...||..|...|.:.
plant   521 LSNNSLEGSLPNPVSS--LSGLQVLDV-------------SANQFSGKIPASLGRLVSLNKLILS 570

  Fly    91 GGQYNHTVQTLFALFKKLKLHNAMRLIKDYVSEDLHKYIPRSVPTISELRAAPDSSAKVNNGPPF 155
            ...::.::.|...:...|:|       .|..|.:|...||..:..|..|..|             
plant   571 KNLFSGSIPTSLGMCSGLQL-------LDLGSNELSGEIPSELGDIENLEIA------------- 615

  Fly   156 PSSSGVSNSNNNRTSTTATEEIPSLESLGNIHISTVQRAAESLLEIDYAELE------------N 208
                  .|.::||.:.....:|.||..|..:.:|      .::||.|.|.|.            |
plant   616 ------LNLSSNRLTGKIPSKIASLNKLSILDLS------HNMLEGDLAPLANIENLVSLNISYN 668

  Fly   209 ATDGWSPDNRL-------------------------------GQGGFGDVYRGKWKQLDVAIKV- 241
            :..|:.|||:|                               |.|..||..|.:..:|.:|:.: 
plant   669 SFSGYLPDNKLFRQLSPQDLEGNKKLCSSTQDSCFLTYRKGNGLGDDGDASRTRKLRLTLALLIT 733

  Fly   242 -----------------------------------------MNYR---------SPNI------- 249
                                                     :|:.         .||:       
plant   734 LTVVLMILGAVAVIRARRNIDNERDSELGETYKWQFTPFQKLNFSVDQIIRCLVEPNVIGKGCSG 798

  Fly   250 ---------------------------DQKMVELQQSYN-ELKYLNSIRHDNILALYGYSIKGGK 286
                                       |:|...::.|:: |:|.|.:|||.||:...|.......
plant   799 VVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNT 863

  Fly   287 PCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPAN 351
            ..|:|..|..|||.:.|...:..    :|.|..|:.|.||.|:|:.:||.....|::|.|||..|
plant   864 RLLMYDYMPNGSLGSLLHERRGS----SLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANN 924

  Fly   352 ILLDQCLQPKIGDFG---LVREGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIV 413
            ||:....:|.|.|||   ||.||    |.....|.|.|:..|:.||:....:::...||||:|:|
plant   925 ILIGLDFEPYIADFGLAKLVDEG----DIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVV 985

  Fly   414 LLEVFTGRQVTD-RVPENETKKNLLDYVKQQWRQNR--MELLEKHLAAPMGKELDMCMCAIEAGL 475
            :|||.||:|..| .|||.   .:|:|:|    ||||  :|:|:..|.:....|.|..|..:...|
plant   986 VLEVLTGKQPIDPTVPEG---IHLVDWV----RQNRGSLEVLDSTLRSRTEAEADEMMQVLGTAL 1043

  Fly   476 HCTALDPQDRPSMN---AVLKRFE 496
            .|....|.:||:|.   |:||..:
plant  1044 LCVNSSPDERPTMKDVAAMLKEIK 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021 20/97 (21%)
STKc_IRAK 219..498 CDD:270968 102/404 (25%)
AT3G24240NP_189066.1 PLN03150 <59..170 CDD:178695
leucine-rich repeat 107..130 CDD:275380
PLN00113 131..1064 CDD:215061 145/604 (24%)
leucine-rich repeat 131..154 CDD:275380
leucine-rich repeat 155..178 CDD:275380
leucine-rich repeat 179..202 CDD:275380
leucine-rich repeat 203..251 CDD:275380
leucine-rich repeat 252..275 CDD:275380
leucine-rich repeat 276..299 CDD:275380
leucine-rich repeat 300..323 CDD:275380
leucine-rich repeat 324..347 CDD:275380
leucine-rich repeat 348..371 CDD:275380
leucine-rich repeat 372..395 CDD:275380
leucine-rich repeat 396..419 CDD:275380
leucine-rich repeat 420..443 CDD:275380
leucine-rich repeat 444..467 CDD:275380
leucine-rich repeat 468..489 CDD:275380
leucine-rich repeat 492..515 CDD:275380
leucine-rich repeat 516..539 CDD:275380 6/19 (32%)
leucine-rich repeat 540..587 CDD:275380 11/59 (19%)
leucine-rich repeat 588..608 CDD:275380 7/26 (27%)
leucine-rich repeat 612..636 CDD:275380 8/42 (19%)
leucine-rich repeat 660..683 CDD:275380 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.

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