DRSC/TRiP Functional Genomics Resources

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Protein Alignment pll and IKU2

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_188604.1 Gene:IKU2 / 821507 AraportID:AT3G19700 Length:991 Species:Arabidopsis thaliana


Alignment Length:478 Identity:111/478 - (23%)
Similarity:201/478 - (42%) Gaps:122/478 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 DYVSEDLHKYIPRSVPTISELRAAPDSSAKVNNGPPFPSSS---GVSNSNNNRTSTTATEEIPSL 180
            ::....|.:.||.|:.::..|.:...|..|::...|...|:   .:.:.:||:.:.:..|.:.|.
plant   514 NFAGNSLSEEIPESLGSLKLLNSLNLSGNKLSGMIPVGLSALKLSLLDLSNNQLTGSVPESLVSG 578

  Fly   181 ESLGNI-------------------------HIS------------------------------- 189
            ...||.                         |:|                               
plant   579 SFEGNSGLCSSKIRYLRPCPLGKPHSQGKRKHLSKVDMCFIVAAILALFFLFSYVIFKIRRDKLN 643

  Fly   190 -TVQR----AAESLLEIDYAELENATDGWSPDNRLGQGGFGDVYRGKWKQLD-VAIKVM------ 242
             |||:    ...|...:::.|:| ..|....:|.:|:||.|:||:...:..: :|:|.:      
plant   644 KTVQKKNDWQVSSFRLLNFNEME-IIDEIKSENIIGRGGQGNVYKVSLRSGETLAVKHIWCPESS 707

  Fly   243 --------------NYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGGKPCLVYQL 293
                          |.||.|.:.:.        |:..|::|:|.|::.|:..........|||:.
plant   708 HESFRSSTAMLSDGNNRSNNGEFEA--------EVATLSNIKHINVVKLFCSITCEDSKLLVYEY 764

  Fly   294 MKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQCL 358
            |..|||..:|...:.:.   .:.|:.|.:::||.|:|:.:||.....|:||.|:|.:|||||:..
plant   765 MPNGSLWEQLHERRGEQ---EIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEW 826

  Fly   359 QPKIGDFGLVREGPKSLDAVVEVNK---------VFGTKIYLPPEFRNFRQLSTGVDVYSFGIVL 414
            :|:|.||||.:        :::.:.         |.||..|:.||:....:::...||||||:||
plant   827 RPRIADFGLAK--------IIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVL 883

  Fly   415 LEVFTGRQ--VTDRVPENETKKNLLDYVKQQWRQNRMELLEKHLAAPMGKELDMCMCAIEAGLHC 477
            :|:.||::  .||....|:....:....|:..|:..|:|::..:.....::   .:..:...|.|
plant   884 MELVTGKKPLETDFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYKED---ALKVLTIALLC 945

  Fly   478 TALDPQDRPSMNAV---LKRFEP 497
            |...||.||.|.:|   |::.||
plant   946 TDKSPQARPFMKSVVSMLEKIEP 968

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021 1/8 (13%)
STKc_IRAK 219..498 CDD:270968 86/314 (27%)
IKU2NP_188604.1 PLN00113 4..964 CDD:215061 108/472 (23%)
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..148 CDD:275380
leucine-rich repeat 149..173 CDD:275380
leucine-rich repeat 174..198 CDD:275380
leucine-rich repeat 199..222 CDD:275380
leucine-rich repeat 223..246 CDD:275380
leucine-rich repeat 247..270 CDD:275380
leucine-rich repeat 271..293 CDD:275380
leucine-rich repeat 294..317 CDD:275380
leucine-rich repeat 318..389 CDD:275380
leucine-rich repeat 390..413 CDD:275380
leucine-rich repeat 414..437 CDD:275380
leucine-rich repeat 438..461 CDD:275380
leucine-rich repeat 462..483 CDD:275380
leucine-rich repeat 486..509 CDD:275380
leucine-rich repeat 510..528 CDD:275380 3/13 (23%)
leucine-rich repeat 555..577 CDD:275380 3/21 (14%)
Blue background indicates that the domain is not in the aligned region.

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