DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and GPK1

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_188368.2 Gene:GPK1 / 821006 AraportID:AT3G17420 Length:467 Species:Arabidopsis thaliana


Alignment Length:474 Identity:137/474 - (28%)
Similarity:212/474 - (44%) Gaps:97/474 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ISSQKQRGRSASNEFLNIWGGQYNHTVQTLFALF-------------KKLKLHNAMRLIKDYVSE 123
            ::||.:|..:.....|.:|    ...|..|||.|             ||.|..||..|   .|::
plant     1 MTSQLKRTLTKRYGVLELW----EIIVIALFAAFIVILVLSVWLSFRKKSKRSNATTL---PVTQ 58

  Fly   124 DLHKYIPRSVPTISELRAAPDSSAKVNNGPPFPSSSGVSNSNNNRTSTTATEE--IPSLES---- 182
            .     ||....|.|:        .|::|          :||||.||....:|  :..:|:    
plant    59 S-----PRFTEEIKEI--------SVDHG----------SSNNNGTSYQTLDEKFVEDIENGDKF 100

  Fly   183 --------LGNIHI--STVQRAAES----LLEIDY---------AELENATDGWSPDNRLGQGGF 224
                    |...|:  ||....|.|    |.|:.:         .:|:.||:.:|.::.:|.||:
plant   101 SGSLEKKPLVGSHLPPSTPSTTAPSPLLGLPEVSHIGWGHWFTLRDLQLATNHFSKESIIGDGGY 165

  Fly   225 GDVYRGK-WKQLDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGGKPC 288
            |.||.|. ..:..||:|.: ..:|....|...:     |::.:..:||.|::.|.||.::|....
plant   166 GVVYHGTLTNKTPVAVKKL-LNNPGQADKDFRV-----EVEAIGHVRHKNLVRLLGYCVEGTHRM 224

  Fly   289 LVYQLMKGGSLEARLRA---HKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPA 350
            |||:.|..|:||..|..   ||..     |||:.|..:.:|||:.:.:||.|....::|.|||.:
plant   225 LVYEYMNNGNLEQWLHGDMIHKGH-----LTWEARIKVLVGTAKALAYLHEAIEPKVVHRDIKSS 284

  Fly   351 NILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLL 415
            |||:|.....|:.||||.:  ....|:.....:|.||..|:.||:.|...|:...||||:|:|||
plant   285 NILMDDNFDAKLSDFGLAK--LLGADSNYVSTRVMGTFGYVAPEYANSGLLNEKSDVYSYGVVLL 347

  Fly   416 EVFTGRQVTDRV-PENETKKNLLDYVKQQWRQNRM-ELLEKHL-AAPMGKELDMCMCAIEAGLHC 477
            |..|||...|.. |:.|.  ::::::|...:|.:. |:::|.| ..|...||..   |:...|.|
plant   348 EAITGRYPVDYARPKEEV--HMVEWLKLMVQQKQFEEVVDKELEIKPTTSELKR---ALLTALRC 407

  Fly   478 TALDPQDRPSMNAVLKRFE 496
            ...|...||.|:.|.:..|
plant   408 VDPDADKRPKMSQVARMLE 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021 17/68 (25%)
STKc_IRAK 219..498 CDD:270968 94/285 (33%)
TyrKc 219..495 CDD:197581 93/282 (33%)
GPK1NP_188368.2 STKc_IRAK 160..426 CDD:270968 93/283 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.870

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