DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and AT2G28970

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_180463.1 Gene:AT2G28970 / 817446 AraportID:AT2G28970 Length:786 Species:Arabidopsis thaliana


Alignment Length:484 Identity:128/484 - (26%)
Similarity:203/484 - (41%) Gaps:92/484 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LPVRAQLCAHLDALDVWQQLATAVKLYPDQVEQISSQKQRGRSASNEFLNIWGGQYNHTV-QTLF 102
            ||...|....:..||:.....|.  |.|..:..|.|.         ..|::.|..:..:| |||.
plant   324 LPSVFQNLTQIQELDLSNNSLTG--LVPSFLANIKSL---------SLLDLSGNNFTGSVPQTLL 377

  Fly   103 ALFKK---LKLHNAMRLIKDYVSEDLHKYIPRSVPTISEL-------------------RAAPDS 145
            ...|:   |||.....|.| :.|.:..|.....||.|:.:                   :...|:
plant   378 DREKEGLVLKLEGNPELCK-FSSCNPKKKKGLLVPVIASISSVLIVIVVVALFFVLRKKKMPSDA 441

  Fly   146 SAKVNNGPPFPSSSGVSNSNNNRTSTTATEEIPSLESLGNIHISTVQRAAESLLEIDYAELENAT 210
            .|     ||......|..:.::.:|..:.:                       :...|.|::..|
plant   442 QA-----PPSLPVEDVGQAKHSESSFVSKK-----------------------IRFAYFEVQEMT 478

  Fly   211 DGWSPDNRLGQGGFGDVYRG--KWKQLDVAIKVMNYRSPNIDQKMVELQQSYN----ELKYLNSI 269
            :.:  ...||:||||.||.|  ...| .||:|:::..|          .|.|.    |::.|..:
plant   479 NNF--QRVLGEGGFGVVYHGCVNGTQ-QVAVKLLSQSS----------SQGYKHFKAEVELLMRV 530

  Fly   270 RHDNILALYGYSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFL 334
            .|.|:::|.||..:|....|:|:.|..|.|:..|...:...   .|:|:.|..:::..|.|:.:|
plant   531 HHKNLVSLVGYCDEGDHLALIYEYMPNGDLKQHLSGKRGGF---VLSWESRLRVAVDAALGLEYL 592

  Fly   335 HTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEFRNFR 399
            ||....|::|.|||..|||||:..|.|:.||||.|..|...:..|. ..|.||..||.||:....
plant   593 HTGCKPPMVHRDIKSTNILLDERFQAKLADFGLSRSFPTENETHVS-TVVAGTPGYLDPEYYQTN 656

  Fly   400 QLSTGVDVYSFGIVLLEVFTGRQVTDRVPENETKKNLLDYVKQQWRQNRM-ELLEKHLAAPMGKE 463
            .|:...|||||||||||:.|.|.:   :.::..|.:|:::|....|...: .:::.:|..  ..:
plant   657 WLTEKSDVYSFGIVLLEIITNRPI---IQQSREKPHLVEWVGFIVRTGDIGNIVDPNLHG--AYD 716

  Fly   464 LDMCMCAIEAGLHCTALDPQDRPSMNAVL 492
            :.....|||..:.|..:....||||:.|:
plant   717 VGSVWKAIELAMSCVNISSARRPSMSQVV 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021 23/92 (25%)
STKc_IRAK 219..498 CDD:270968 92/281 (33%)
TyrKc 219..495 CDD:197581 92/281 (33%)
AT2G28970NP_180463.1 Malectin_like 28..251 CDD:289580
LRR_8 312..368 CDD:290566 12/54 (22%)
leucine-rich repeat 313..333 CDD:275380 3/8 (38%)
leucine-rich repeat 334..357 CDD:275380 6/24 (25%)
leucine-rich repeat 358..376 CDD:275380 4/26 (15%)
Pkinase 483..746 CDD:278497 92/283 (33%)
STKc_IRAK 485..750 CDD:270968 92/281 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.870

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