DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and AT2G28960

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_180462.2 Gene:AT2G28960 / 817445 AraportID:AT2G28960 Length:880 Species:Arabidopsis thaliana


Alignment Length:405 Identity:110/405 - (27%)
Similarity:166/405 - (40%) Gaps:98/405 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 VNNGPPFPSSSGVSNSNNNRTSTTATEEIPSLESLGNI----------------------HISTV 191
            :...|...:.:...|:||.      |..:|.:.|:.::                      .:.||
plant   488 IQGNPKLCNDASCKNNNNQ------TYIVPVVASVASVLIIIAVLILILVFKKRRPTQVDSLPTV 546

  Fly   192 QRAAESLLEI-------DYAELENATDGWSPDNRLGQGGFGDVYRGKWKQLD-VAIKVMNYRSPN 248
            |....:...|       .|:|:|..||.:  :..||:||||.||.|...... :|:|:::..|  
plant   547 QHGLPNRPSIFTQTKRFTYSEVEALTDNF--ERVLGEGGFGVVYHGILNGTQPIAVKLLSQSS-- 607

  Fly   249 IDQKMVELQQSYNELK----YLNSIRHDNILALYGYSIKGGKPCLVYQLMKGGSLEARLRAHKAQ 309
                    .|.|.|.|    .|..:.|.|:::|.||..:.....|:|:....|.|:..|...:..
plant   608 --------VQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGG 664

  Fly   310 NPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREGPKS 374
            :|   |.|..|..|.:.||:|:.:|||....|::|.|:|..|||||:..|.|:.||||.|..|..
plant   665 SP---LKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVG 726

  Fly   375 LDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVTDRVPENETKKNLLDY 439
            .:..|. ..|.||..||.||:....:|:...|||||||||||:.|.|.|.               
plant   727 GETHVS-TAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVI--------------- 775

  Fly   440 VKQQWRQNRMELLEKHLAAPMG-------------------KELDMCMCAIEAGLHCTALDPQDR 485
              ||.|:      :.|:||.:|                   .|......|:|..:.|.....:.|
plant   776 --QQTRE------KPHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKR 832

  Fly   486 PSMNAVLKRFEPFVT 500
            |:|:.|....:..:|
plant   833 PTMSQVTNELKQCLT 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021
STKc_IRAK 219..498 CDD:270968 93/302 (31%)
TyrKc 219..495 CDD:197581 93/299 (31%)
AT2G28960NP_180462.2 Malectin_like 35..351 CDD:289580
leucine-rich repeat 410..433 CDD:275380
leucine-rich repeat 434..457 CDD:275380
leucine-rich repeat 458..476 CDD:275380
TyrKc 575..842 CDD:197581 93/305 (30%)
STKc_IRAK 579..844 CDD:270968 93/301 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.870

Return to query results.
Submit another query.