DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and FRK1

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_179509.1 Gene:FRK1 / 816436 AraportID:AT2G19190 Length:876 Species:Arabidopsis thaliana


Alignment Length:560 Identity:142/560 - (25%)
Similarity:222/560 - (39%) Gaps:137/560 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TMAIRLLPLPVRAQLCAHLDALDVWQ-----QLATAVKLYPDQVEQISSQKQRGRSASNEFLNIW 90
            |:...||..|....|...::||:|:|     |:.|    :|..|:.:...|...|...|     |
plant   333 TINFSLLQPPGEFVLPPIINALEVYQVNEFLQIPT----HPQDVDAMRKIKATYRVKKN-----W 388

  Fly    91 GGQ--------------------YNHTVQTLFALFKKLK------LHNAMRLIK-DYVSEDLHKY 128
            .|.                    .|..|.:|...|.:|:      ..|...:.| |.....|...
plant   389 QGDPCVPVDYSWEGIDCIQSDNTTNPRVVSLNISFSELRGQIDPAFSNLTSIRKLDLSGNTLTGE 453

  Fly   129 IP---RSVPTISELRAAPDS------------------SAKVNNGPPFPSSSGVSNS---NNN-- 167
            ||   .::|.::||....:.                  |.:....|....|...||:   |.|  
plant   454 IPAFLANLPNLTELNVEGNKLTGIVPQRLHERSKNGSLSLRFGRNPDLCLSDSCSNTKKKNKNGY 518

  Fly   168 -------------RTSTTATEEIPSLESLG-----NIHISTVQRAAESLLEIDYAELENATDGWS 214
                         .|:..........:..|     |..:.|.:|      ...|:|:.|.|:.: 
plant   519 IIPLVVVGIIVVLLTALALFRRFKKKQQRGTLGERNGPLKTAKR------YFKYSEVVNITNNF- 576

  Fly   215 PDNRLGQGGFGDVYRGKWKQLDVAIKVMNYRSPNIDQKMVELQQSYNELK----YLNSIRHDNIL 275
             :..:|:||||.||.|......||:||::..|          .|.|.|.:    .|..:.|.|:.
plant   577 -ERVIGKGGFGKVYHGVINGEQVAVKVLSEES----------AQGYKEFRAEVDLLMRVHHTNLT 630

  Fly   276 ALYGYSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGT 340
            :|.||..:.....|:|:.|...:|...|...::.    .|:|::|..|||..|:|:.:||.....
plant   631 SLVGYCNEINHMVLIYEYMANENLGDYLAGKRSF----ILSWEERLKISLDAAQGLEYLHNGCKP 691

  Fly   341 PLIHGDIKPANILLDQCLQPKIGDFGLVR----EGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQL 401
            |::|.|:||.||||::.||.|:.||||.|    ||...:..||.     |:..||.||:.:.||:
plant   692 PIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVA-----GSIGYLDPEYYSTRQM 751

  Fly   402 STGVDVYSFGIVLLEVFTGRQVTDRVPENETKK-NLLDYVKQQWRQNRM------ELLEKHLAAP 459
            :...||||.|:|||||.||:..   :..::|:| ::.|:|:.......:      .|.|::   .
plant   752 NEKSDVYSLGVVLLEVITGQPA---IASSKTEKVHISDHVRSILANGDIRGIVDQRLRERY---D 810

  Fly   460 MGKELDMCMCAIEAGLHCTALDPQDRPSMNAVLKRFEPFV 499
            :|....|.    |..|.||......||:|:.|:...:..|
plant   811 VGSAWKMS----EIALACTEHTSAQRPTMSQVVMELKQIV 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021 26/127 (20%)
STKc_IRAK 219..498 CDD:270968 93/293 (32%)
TyrKc 219..495 CDD:197581 93/290 (32%)
FRK1NP_179509.1 Malectin_like 33..358 CDD:289580 8/24 (33%)
leucine-rich repeat 396..415 CDD:275380 1/18 (6%)
leucine-rich repeat 416..439 CDD:275380 5/22 (23%)
leucine-rich repeat 440..463 CDD:275380 5/22 (23%)
leucine-rich repeat 464..479 CDD:275380 2/14 (14%)
STYKc 576..839 CDD:214568 92/293 (31%)
STKc_IRAK 580..845 CDD:270968 93/293 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.870

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