DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and AT2G16250

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_179220.2 Gene:AT2G16250 / 816121 AraportID:AT2G16250 Length:915 Species:Arabidopsis thaliana


Alignment Length:361 Identity:92/361 - (25%)
Similarity:154/361 - (42%) Gaps:67/361 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 NNNRTSTT--ATEEIP------SLESLGNIHISTVQRAAESLLEIDYAELENATDGWSPDNRLGQ 221
            ||:|....  |:::.|      .|..|||              ...|.:|..||:.::..|.:.:
plant   485 NNDRPKPAGEASQQPPKGAQTFDLSRLGN--------------AFSYEQLLQATEEFNDANLIKR 535

  Fly   222 GGFGDVYRGKWKQ-LDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKG- 284
            |..|:::||..:. :.|.||       .||.:..:.:...:||:..:...|..::...|:.::. 
plant   536 GHSGNLFRGFLENGIPVVIK-------KIDVREGKSEGYISELELFSKAGHQRLVPFLGHCLENE 593

  Fly   285 GKPCLVYQLMKGGSLEARLRAHKAQNP---LPALTWQQRFSISLGTARGIYFLHTARGTPLIHGD 346
            .:..|||:.|:.|.|.:.| ..|::|.   |.:|.|..|..|:||.|.|:.:||.....||:|.|
plant   594 SQKFLVYKFMRHGDLASSL-FRKSENEGDGLKSLDWITRLKIALGAAEGLSYLHHECSPPLVHRD 657

  Fly   347 IKPANILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKI----YLPPEFRNFRQLSTGV-- 405
            ::.::||||...:.::|          ||.........:.::|    .||   ::....|:||  
plant   658 VQASSILLDDKFEVRLG----------SLSEAYAQGDAYQSRISRLLRLP---QSSEPSSSGVTN 709

  Fly   406 -----DVYSFGIVLLEVFTGRQVTDRVPENETKKNLLDYVKQQWRQNRMELLEKHLAAPMGKELD 465
                 |||.||.||||:.||: :....|:|...|..::........|..||:.|.|...:..:.|
plant   710 AICSYDVYCFGKVLLELVTGK-LGISSPDNALAKEYMEEALPYISTNEKELVTKILDPSLMVDED 773

  Fly   466 M-----CMCAIEAGLHCTALDPQDRPSMNAVLKRFE 496
            :     .|..|...  |....|..||.|..::...|
plant   774 LLEEVWAMAIIAKS--CLNPKPTRRPLMRHIVNALE 807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021
STKc_IRAK 219..498 CDD:270968 78/299 (26%)
AT2G16250NP_179220.2 leucine-rich repeat 105..129 CDD:275380
PLN00113 <115..811 CDD:215061 92/361 (25%)
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..177 CDD:275380
leucine-rich repeat 178..201 CDD:275380
leucine-rich repeat 202..225 CDD:275380
leucine-rich repeat 226..249 CDD:275380
leucine-rich repeat 250..273 CDD:275380
leucine-rich repeat 274..298 CDD:275380
leucine-rich repeat 299..320 CDD:275380
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.