DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and AT2G01820

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_178291.1 Gene:AT2G01820 / 814713 AraportID:AT2G01820 Length:943 Species:Arabidopsis thaliana


Alignment Length:362 Identity:118/362 - (32%)
Similarity:195/362 - (53%) Gaps:47/362 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 SSSGVSNSNNNRTSTTATEEIPSLESLGNIHISTVQRAAESLLEIDYAELENATDGWSPDNRLGQ 221
            :|.|.|:|.::  |.:|..:|..:|: ||:.||         :::    |.|.|:.:|.:|.||:
plant   545 NSGGGSDSYSH--SGSAASDIHVVEA-GNLVIS---------IQV----LRNVTNNFSEENILGR 593

  Fly   222 GGFGDVYRGKWKQ-LDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGG 285
            ||||.||:|:... ..:|:|.|. .|...|:.:.|.:   :|:..|..:||.:::||.||.:.|.
plant   594 GGFGTVYKGELHDGTKIAVKRME-SSVVSDKGLTEFK---SEITVLTKMRHRHLVALLGYCLDGN 654

  Fly   286 KPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPA 350
            :..|||:.|..|:|...|...|.:...| |.|.:|.:|:|..|||:.:|||......||.|:||:
plant   655 ERLLVYEYMPQGTLSQHLFHWKEEGRKP-LDWTRRLAIALDVARGVEYLHTLAHQSFIHRDLKPS 718

  Fly   351 NILLDQCLQPKIGDFGLVR---EGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGI 412
            ||||...::.|:.||||||   :|..|::     .:|.||..||.||:....:::|.||::|.|:
plant   719 NILLGDDMRAKVSDFGLVRLAPDGKYSIE-----TRVAGTFGYLAPEYAVTGRVTTKVDIFSLGV 778

  Fly   413 VLLEVFTGRQVTDRV-PENETKKNLLDYVKQQWRQNRMELLEKHLAAPMGKELDMCMCAIE---- 472
            :|:|:.|||:..|.. ||:..  :|:.:.::. ..::.|...|:...|.....|..:.:||    
plant   779 ILMELITGRKALDETQPEDSV--HLVTWFRRV-AASKDENAFKNAIDPNISLDDDTVASIEKVWE 840

  Fly   473 -AGLHCTALDPQDRPSM-------NAVLKRFEPFVTD 501
             || ||.|.:|..||.|       :::..:::|..||
plant   841 LAG-HCCAREPYQRPDMAHIVNVLSSLTVQWKPTETD 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021
STKc_IRAK 219..498 CDD:270968 98/295 (33%)
TyrKc 219..495 CDD:197581 98/292 (34%)
AT2G01820NP_178291.1 PLN00113 35..865 CDD:215061 115/349 (33%)
leucine-rich repeat 91..113 CDD:275380
leucine-rich repeat 114..137 CDD:275380
leucine-rich repeat 138..162 CDD:275380
leucine-rich repeat 163..188 CDD:275380
leucine-rich repeat 189..211 CDD:275380
leucine-rich repeat 212..234 CDD:275380
leucine-rich repeat 235..257 CDD:275380
leucine-rich repeat 258..281 CDD:275380
leucine-rich repeat 390..413 CDD:275380
STKc_IRAK 591..866 CDD:270968 98/288 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.870

Return to query results.
Submit another query.